Evidence map›Paper›PMID 35936554›Full record

ArticleCell reports. Physical science2022

AI/ML-driven advances in untargeted metabolomics and exposomics for biomedical applications.

Lauren M Petrick, Noam Shomron

Abstract read
In one paragraph

Article in Cell reports. Physical science, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed.

  1. Review
  2. Review
  3. Article
  4. Review
  5. Review
  6. Review
  7. Review
  8. Article
  9. Review
  10. Comparative analysis of continuous similarity measures for compound identification in mass spectrometry-based metabolomics.Chemometrics and intelligent laboratory systems : an international journal sponsored by the Chemometrics Society · 2025
    Article
  11. Review
  12. Article
  13. Review
  14. Article
  15. Article
  16. Article
  17. Review
  18. Review
  19. Artificial Intelligence in Metabolomics: A Current Review.Trends in analytical chemistry : TRAC · 2024
    Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Lauren M PetrickThe Bert Strassburger Metabolic Center, Sheba Medical Center, Tel-Hashomer, Israel.
Noam ShomronFaculty of Medicine, Edmond J. Safra Center for Bioinformatics, Sagol School of Neuroscience, Center for Nanoscience and Nanotechnology, Center for Innovation Laboratories (TILabs), Tel Aviv University, Tel Aviv, Israel.

Funding

Untargeted Analysis ResourceU2CES026561 · NIEHS · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI WRIGHT, ROBERT O · 2015 to 2025
$24.5M
The Mount Sinai Transdisciplinary Center on Early Environmental ExposuresP30ES023515 · NIEHS · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI Manish Arora · 2014 to 2026
$21.3M
Untargeted Analysis ResourceU2CES030859 · NIEHS · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI ARORA, MANISH · 2019 to 2025
$8.2M
Environmental chemical mixtures and metabolomics in autism spectrum disorderR01ES031117 · NIEHS · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI PETRICK, LAUREN · 2020 to 2024
$3.3M
Discovery of early life causes of autism spectrum disorder through retrospective metabolomics and proteome analysis of teethR21ES030882 · NIEHS · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI ANDRA, SYAM S, PETRICK, LAUREN · 2019 to 2020
$466k
Fetal Origins of Testicular Cancer: A Metabolomics Study in NewbornsUH2CA248974 · NCI · UNIVERSITY OF CALIFORNIA BERKELEY · PI METAYER, CATHERINE, PETRICK, LAUREN · 2021 to 2022
$434k
NCI NIH HHS UH2 CA248974NIEHS NIH HHS P30 ES023515NIEHS NIH HHS R01 ES031117NIEHS NIH HHS R21 ES030882NIEHS NIH HHS U2C ES026561NIEHS NIH HHS U2C ES030859
6 · The paper itself

Abstract

Metabolomics describes a high-throughput approach for measuring a repertoire of metabolites and small molecules in biological samples. One utility of untargeted metabolomics, unbiased global analysis of the metabolome, is to detect key metabolites as contributors to, or readouts of, human health and disease. In this perspective, we discuss how artificial intelligence (AI) and machine learning (ML) have promoted major advances in untargeted metabolomics workflows and facilitated pivotal findings in the areas of disease screening and diagnosis. We contextualize applications of AI and ML to the emerging field of high-resolution mass spectrometry (HRMS) exposomics, which unbiasedly detects endogenous metabolites and exogenous chemicals in human tissue to characterize exposure linked with disease outcomes. We discuss the state of the science and suggest potential opportunities for using AI and ML to improve data quality, rigor, detection, and chemical identification in untargeted metabolomics and exposomics studies.

Identifiers

PMID35936554
PMCPMC9354369

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.