Evidence map›Paper›PMID 35933385›Full record

ArticleMicrobial cell factories2022

Adaptation on xylose improves glucose-xylose co-utilization and ethanol production in a carbon catabolite repression (CCR) compromised ethanologenic strain.

Chandra Dev, Syed Bilal Jilani, Syed Shams Yazdani

Open access · goldAbstract read
In one paragraph

Article in Microbial cell factories, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
2.5field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 34 citations in OpenAlex.

  1. Review
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  7. Microbial Metabolism: Primary and Secondary Metabolites.Progress in molecular and subcellular biology · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 3 institutions in 2 countries.

Chandra DevMicrobial Engineering Group, International Centre for Genetic Engineering and Biotechnology, New Delhi, India.
Syed Bilal JilaniMicrobial Engineering Group, International Centre for Genetic Engineering and Biotechnology, New Delhi, India.
Syed Shams YazdaniMicrobial Engineering Group, International Centre for Genetic Engineering and Biotechnology, New Delhi, India. shams@icgeb.res.in.
Centre for Advanced Bioenergy Research · INInternational Centre for Genetic Engineering and Biotechnology · INInternational Centre for Genetic Engineering and Biotechnology · ZA

Funding

Department of Biotechnology, Ministry of Science and Technology, India BT/PR/Centre/03/2011-Phase II
6 · The paper itself

Abstract

backgroundSugar hydrolysates from lignocellulosic biomass are majorly composed of glucose and xylose that can be fermented to biofuels. Bacteria, despite having the natural ability to consume xylose are unable to consume it in presence of glucose due to a carbon catabolite repression (CCR) mechanism. This leads to overall reduced productivity as well as incomplete xylose utilization due to ethanol build-up from glucose utilization. In our effort to develop a strain for simultaneous fermentation of glucose and xylose into ethanol, we deleted ptsG in ethanologenic E. coli SSK42 to make it deficient in CCR and performed adaptive laboratory evolution to achieve accelerated growth rate, sugar consumption and ethanol production. Finally, we performed proteomics study to identify changes that might have been responsible for the observed improved phenotype of the evolved strain.

resultsThe parental strain of SSK42, i.e., wild-type E. coli B, did not co-utilize glucose and xylose as expected. After deleting the ptsG gene encoding the EIIBC

conclusionThrough adaptive evolution, we have obtained a strain that has a significant glucose-xylose co-utilization phenotype with 3-fold higher total sugar consumption rate and ethanol production rate compared to the unevolved strain. This study also points out that adaptation on xylose is enough to impart glucose-xylose co-utilization property in CCR compromised ethanologenic strain SSK42.

Indexed as

Catabolite RepressionXyloseDietary SugarsEscherichia coliEthanolFermentationGlucoseSugarsDietary SugarsEthanolGlucoseSugarsXyloseAdaptive laboratory evolutionBioreactorCarbon catabolite repressionCo-utilizationE. coli BEIIBCGlcEthanologenic strainSugar mixture

Identifiers

PMID35933385
PMCPMC9356451
OpenAlexW4290000928

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.