Evidence map›Paper›PMID 35932729›Full record

ArticleComputers in biology and medicine2022

Stacked dilated convolutions and asymmetric architecture for U-Net-based medical image segmentation.

Shuhang Wang, Vivek Kumar Singh, Eugene Cheah, Xiaohong Wang, Qian Li, Shinn-Huey Chou, Constance D Lehman, Viksit Kumar, Anthony E Samir

Abstract read
In one paragraph

Article in Computers in biology and medicine, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

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0cells of the map it votes in
5citing papers in PubMed
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1 · What the graph read from it

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2 · The registry

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3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

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4 · The record

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5 · Who and what money

Authors and funding

9 authors.

Shuhang WangDepartment of Radiology, Massachusetts General Hospital, Harvard Medical School, Boston, 02114, MA, USA. Electronic address: swang38@mgh.harvard.edu.
Vivek Kumar SinghDepartment of Radiology, Massachusetts General Hospital, Harvard Medical School, Boston, 02114, MA, USA.
Eugene CheahDepartment of Radiology, Massachusetts General Hospital, Harvard Medical School, Boston, 02114, MA, USA.
Xiaohong WangDepartment of Radiology, Massachusetts General Hospital, Harvard Medical School, Boston, 02114, MA, USA.
Qian LiDepartment of Radiology, Massachusetts General Hospital, Harvard Medical School, Boston, 02114, MA, USA.
Shinn-Huey ChouDepartment of Radiology, Massachusetts General Hospital, Harvard Medical School, Boston, 02114, MA, USA.
Constance D LehmanDepartment of Radiology, Massachusetts General Hospital, Harvard Medical School, Boston, 02114, MA, USA.
Viksit KumarDepartment of Radiology, Massachusetts General Hospital, Harvard Medical School, Boston, 02114, MA, USA.
Anthony E SamirDepartment of Radiology, Massachusetts General Hospital, Harvard Medical School, Boston, 02114, MA, USA.

Funding

Development of a Machine Learning Model to Integrate Clinical, Laboratory, Sonographic, and Elastographic Data for Noninvasive Liver Tissue Characterization in NAFLDR01DK119860 · NIDDK · MASSACHUSETTS GENERAL HOSPITAL · PI SAMIR, ANTHONY EDWARD · 2019 to 2023
$2.3M
NIDDK NIH HHS R01 DK119860
6 · The paper itself

Abstract

Deep learning has been widely utilized for medical image segmentation. The most commonly used U-Net and its variants often share two common characteristics but lack solid evidence for the effectiveness. First, each block (i.e., consecutive convolutions of feature maps of the same resolution) outputs feature maps from the last convolution, limiting the variety of the receptive fields. Second, the network has a symmetric structure where the encoder and the decoder paths have similar numbers of channels. We explored two novel revisions: a stacked dilated operation that outputs feature maps from multi-scale receptive fields to replace the consecutive convolutions; an asymmetric architecture with fewer channels in the decoder path. Two novel models were developed: U-Net using the stacked dilated operation (SDU-Net) and asymmetric SDU-Net (ASDU-Net). We used both publicly available and private datasets to assess the efficacy of the proposed models. Extensive experiments confirmed SDU-Net outperformed or achieved performance similar to the state-of-the-art while using fewer parameters (40% of U-Net). ASDU-Net further reduced the model parameters to 20% of U-Net with performance comparable to SDU-Net. In conclusion, the stacked dilated operation and the asymmetric structure are promising for improving the performance of U-Net and its variants.

Indexed as

Image Processing, Computer-AssistedNeural Networks, ComputerAsymmetricMedical imageSegmentationStacked dilated convolutionsU-Net

Identifiers

PMID35932729
PMCPMC9596264

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.