Evidence map›Paper›PMID 35927584›Full record

ArticleNature structural & molecular biology2022

Yeast PI31 inhibits the proteasome by a direct multisite mechanism.

Shaun Rawson, Richard M Walsh, Benjamin Velez, Helena M Schnell, Fenglong Jiao, Marie Blickling, Jessie Ang, Meera K Bhanu, Lan Huang, John Hanna

Open access · greenAbstract read
In one paragraph

Article in Nature structural & molecular biology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
1.8field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 24 citations in OpenAlex.

  1. Article
  2. Article
  3. Plasticity in the structure and assembly of proteasomes.The Journal of biological chemistry · 2026
    Review
  4. Review
  5. Article
  6. Article
  7. Article
  8. Review
  9. Proteasome: Role in T Cell Function Regulation.International journal of biological sciences · 2025
    Review
  10. Article
  11. Article
  12. Rational design of proteasome inhibitors based on the structure of the endogenous inhibitor PI31/Fub1.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  13. Article
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 1 country.

Shaun Rawson *Harvard Cryo-Electron Microscopy Center for Structural Biology, Harvard Medical School, Boston, MA, USA.ORCID http://orcid.org/0000-0002-2973-2630
Richard M Walsh *Harvard Cryo-Electron Microscopy Center for Structural Biology, Harvard Medical School, Boston, MA, USA.ORCID http://orcid.org/0000-0002-8939-8988
Benjamin VelezDepartment of Pathology, Harvard Medical School and Brigham and Women's Hospital, Boston, MA, USA.ORCID http://orcid.org/0000-0002-9090-0699
Helena M SchnellDepartment of Pathology, Harvard Medical School and Brigham and Women's Hospital, Boston, MA, USA.ORCID http://orcid.org/0000-0002-7840-4473
Fenglong JiaoDepartment of Physiology and Biophysics, University of California, Irvine, Irvine, CA, USA.
Marie BlicklingDepartment of Pathology, Harvard Medical School and Brigham and Women's Hospital, Boston, MA, USA.
Jessie AngDepartment of Pathology, Harvard Medical School and Brigham and Women's Hospital, Boston, MA, USA.
Meera K BhanuDepartment of Pathology, Harvard Medical School and Brigham and Women's Hospital, Boston, MA, USA.
Lan HuangDepartment of Physiology and Biophysics, University of California, Irvine, Irvine, CA, USA.ORCID http://orcid.org/0000-0002-3140-4687
John HannaDepartment of Pathology, Harvard Medical School and Brigham and Women's Hospital, Boston, MA, USA. jwhanna@bwh.harvard.edu.ORCID http://orcid.org/0000-0003-2964-1058
Brigham and Women's Hospital · USHarvard University · USUniversity of California, Irvine · US

Funding

Proteomics of the Proteasome Interacting NetworksR01GM074830 · NIGMS · UNIVERSITY OF CALIFORNIA-IRVINE · PI HUANG, LAN · 2005 to 2022
$6.1M
New Ubiquitin-Proteasome System Components that Protect against ProteotoxicityDP5OD019800 · OD · BRIGHAM AND WOMEN'S HOSPITAL · PI HANNA, JOHN W · 2014 to 2018
$2.2M
Structural and Functional Analysis of Proteasome Core Particle BiogenesisR01GM144367 · NIGMS · BRIGHAM AND WOMEN'S HOSPITAL · PI HANNA, JOHN W · 2022 to 2025
$1.6M
Structural dynamics and function of the COP9 signalosomeR01GM130144 · NIGMS · UNIVERSITY OF CALIFORNIA-IRVINE · PI HUANG, LAN · 2018 to 2021
$1.2M
NIGMS NIH HHS R01 GM074830NIGMS NIH HHS R01 GM130144NIGMS NIH HHS R01 GM144367NIH HHS DP5 OD019800
6 · The paper itself

Abstract

Proteasome inhibitors are widely used as therapeutics and research tools, and typically target one of the three active sites, each present twice in the proteasome complex. An endogeneous proteasome inhibitor, PI31, was identified 30 years ago, but its inhibitory mechanism has remained unclear. Here, we identify the mechanism of Saccharomyces cerevisiae PI31, also known as Fub1. Using cryo-electron microscopy (cryo-EM), we show that the conserved carboxy-terminal domain of Fub1 is present inside the proteasome's barrel-shaped core particle (CP), where it simultaneously interacts with all six active sites. Targeted mutations of Fub1 disrupt proteasome inhibition at one active site, while leaving the other sites unaffected. Fub1 itself evades degradation through distinct mechanisms at each active site. The gate that allows substrates to access the CP is constitutively closed, and Fub1 is enriched in mutant CPs with an abnormally open gate, suggesting that Fub1 may function to neutralize aberrant proteasomes, thereby ensuring the fidelity of proteasome-mediated protein degradation.

Indexed as

Saccharomyces cerevisiaeCryoelectron MicroscopyCytoplasmProteasome Endopeptidase ComplexSaccharomyces cerevisiae ProteinsFub1 protein, S cerevisiaeProteasome Endopeptidase ComplexSaccharomyces cerevisiae Proteins

Identifiers

PMID35927584
PMCPMC9399903
OpenAlexW4289783473

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.