Evidence map›Paper›PMID 35927536›Full record

ArticleEuropean journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology2022

Genome-wide association study of SARS-CoV-2 infection in Chinese population.

Jie Fan, Quan-Xin Long, Ji-Hua Ren, Hao Chen, Meng-Meng Li, Zheng Cheng, Juan Chen, Li Zhou, Ai-Long Huang

Open access · bronzeAbstract read
In one paragraph

Article in European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.5field-weighted citation impact, top 36% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 5 citations in OpenAlex.

  1. Review
  2. Article
  3. Genetic variants inHeliyon · 2024
    Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Jie FanDepartment of Epidemiology, School of Public Health and Management, Research Center for Medicine and Social Development, Innovation Center for Social Risk Governance in Health, Chongqing Medical University, Chongqing, 400016, China.
Quan-Xin LongKey Laboratory of Molecular Biology On Infectious Diseases, Chinese Ministry of Education, Chongqing Medical University, Room 617, College of Life Sciences Building, 1 YixueYuan Road, YuZhong District, Chongqing, 400016, China.
Ji-Hua RenKey Laboratory of Molecular Biology On Infectious Diseases, Chinese Ministry of Education, Chongqing Medical University, Room 617, College of Life Sciences Building, 1 YixueYuan Road, YuZhong District, Chongqing, 400016, China.
Hao ChenDepartment of Epidemiology, School of Public Health and Management, Research Center for Medicine and Social Development, Innovation Center for Social Risk Governance in Health, Chongqing Medical University, Chongqing, 400016, China.
Meng-Meng LiDepartment of Epidemiology, School of Public Health and Management, Research Center for Medicine and Social Development, Innovation Center for Social Risk Governance in Health, Chongqing Medical University, Chongqing, 400016, China.
Zheng ChengDepartment of Epidemiology, School of Public Health and Management, Research Center for Medicine and Social Development, Innovation Center for Social Risk Governance in Health, Chongqing Medical University, Chongqing, 400016, China.
Juan ChenKey Laboratory of Molecular Biology On Infectious Diseases, Chinese Ministry of Education, Chongqing Medical University, Room 617, College of Life Sciences Building, 1 YixueYuan Road, YuZhong District, Chongqing, 400016, China. chenjuan2014@cqmu.edu.cn.
Li ZhouDepartment of Epidemiology, School of Public Health and Management, Research Center for Medicine and Social Development, Innovation Center for Social Risk Governance in Health, Chongqing Medical University, Chongqing, 400016, China. zhouli@cqmu.edu.cn.ORCID http://orcid.org/0000-0002-6523-9747
Ai-Long HuangKey Laboratory of Molecular Biology On Infectious Diseases, Chinese Ministry of Education, Chongqing Medical University, Room 617, College of Life Sciences Building, 1 YixueYuan Road, YuZhong District, Chongqing, 400016, China. ahuang@cqmu.edu.cn.
Chongqing Public Health Medical Center · CNChongqing Medical University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Coronavirus disease 2019 (COVID-19) is a global public health concern. The purpose of this study was to investigate the association between genetic variants and SARS-CoV-2 infection and the COVID-19 severity in Chinese population. A total of 256 individuals including 87 symptomatic patients (tested positive for SARS-CoV-2), 84 asymptomatic cases, and 85 close contacts of confirmed patients (tested negative for SARS-CoV-2) were recruited from February 2020 to May 2020. We carried out the whole exome genome sequencing between the individuals and conducted a genetic association study for SARS-CoV-2 infection and the COVID-19 severity. In total, we analyzed more than 100,000 single-nucleotide polymorphisms. The genome-wide association study suggested potential correlation between genetic variability in POLR2A, ANKRD27, MAN1A2, and ERAP1 genes and SARS-CoV-2 infection susceptibility. The most significant gene locus associated with SARS-CoV-2 infection was located in POLR2A (p = 5.71 × 10

Indexed as

COVID-19AminopeptidasesChinaGenome-Wide Association StudyHumansIntracellular Signaling Peptides and ProteinsMinor Histocompatibility AntigensPolymorphism, Single NucleotideSARS-CoV-2AminopeptidasesERAP1 protein, humanIntracellular Signaling Peptides and ProteinsMinor Histocompatibility AntigensPLCL2 protein, humanCOVID-19GWASSARS-CoV2SeveritySusceptibility

Identifiers

PMID35927536
PMCPMC9362144
OpenAlexW4289972136

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.