Evidence map›Paper›PMID 35927394›Full record

ArticleZoological research2022

Diversity of reptile sex chromosome evolution revealed by cytogenetic and linked-read sequencing.

Ze-Xian Zhu, Kazumi Matsubara, Foyez Shams, Jason Dobry, Erik Wapstra, Tony Gamble, Stephen D Sarre, Arthur Georges, Jennifer A Marshall Graves, Qi Zhou and 1 more

Open access · diamondAbstract read
In one paragraph

Article in Zoological research, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
3.7field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 20 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Widespread chromosomal rearrangements preceded genetic divergence in a monitor lizard, Varanus acanthurus (Varanidae).Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology · 2023
    Article
  9. Article
  10. Article
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 5 institutions in 4 countries.

Ze-Xian ZhuMOE Laboratory of Biosystems Homeostasis and Protection and Zhejiang Provincial Key Laboratory for Cancer Molecular Cell Biology, Life Sciences Institute, Zhejiang University, Hangzhou, Zhejiang 310058, China.
Kazumi MatsubaraInstitute for Applied Ecology, University of Canberra, Canberra 2601, Australia.
Foyez ShamsInstitute for Applied Ecology, University of Canberra, Canberra 2601, Australia.
Jason DobryInstitute for Applied Ecology, University of Canberra, Canberra 2601, Australia.
Erik WapstraSchool of Biological Sciences, University of Tasmania, Hobart, Tasmania 7001, Australia.
Tony GambleDepartment of Biological Sciences, Marquette University, Milwaukee, Wisconsin 52322, USA.
Stephen D SarreInstitute for Applied Ecology, University of Canberra, Canberra 2601, Australia.
Arthur GeorgesInstitute for Applied Ecology, University of Canberra, Canberra 2601, Australia.
Jennifer A Marshall GravesInstitute for Applied Ecology, University of Canberra, Canberra 2601, Australia.
Qi ZhouMOE Laboratory of Biosystems Homeostasis and Protection and Zhejiang Provincial Key Laboratory for Cancer Molecular Cell Biology, Life Sciences Institute, Zhejiang University, Hangzhou, Zhejiang 310058, China.
Tariq EzazInstitute for Applied Ecology, University of Canberra, Canberra 2601, Australia. E-mail: Tariq.Ezaz@canberra.edu.au.
University of Canberra · AUMarquette University · USUniversity of Vienna · ATUniversity of Tasmania · AUZhejiang University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Reptile sex determination is attracting much attention because the great diversity of sex-determination and dosage compensation mechanisms permits us to approach fundamental questions about mechanisms of sex chromosome turnover. Recent studies have made significant progress in better understanding diversity and conservation of reptile sex chromosomes, with however no reptile master sex determination genes identified. Here we describe an integrated genomics and cytogenetics pipeline, combining probes generated from the microdissected sex chromosomes with transcriptome and genome sequencing to explore the sex chromosome diversity in non-model Australian reptiles. We tested our pipeline on a turtle, two species of geckos, and a monitor lizard. Genes identified on sex chromosomes were compared to the chicken genome to identify homologous regions among the four species. We identified candidate sex determining genes within these regions, including conserved vertebrate sex-determining genes

Indexed as

Evolution, MolecularLizardsAnimalsAustraliaCytogenetic AnalysisFemaleMaleSex ChromosomesCytogeneticsGenomicsReptilesSex chromosome turnoverSex determination

Identifiers

PMID35927394
PMCPMC9486513
OpenAlexW4288468261

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.