Evidence map›Paper›PMID 35924937›Full record

ArticleMicrobiology resource announcements2022

Complete Genome Sequence of Providencia stuartii CMC-4104, Isolated from a Human Splenic Abscess, Containing Multiple Copies of NDM-1 and PER-1 Carbapenem Resistance Genes.

Jayasimha Rao, Nicholas K Stornelli, Nathan A Everson, Lauren F McDaniel, Mariana Gomez De La Espriella, Jason R Faulhaber, S Michelle Todd, Kevin K Lahmers, Roderick V Jensen

Open access · diamondAbstract read
In one paragraph

Article in Microbiology resource announcements, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.2field-weighted citation impact, top 60% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 3 citations in OpenAlex.

  1. Article
  2. Genomic surveillance detects interregional spread of New Delhi metallo-beta-lactamase-1-producingEuro surveillance : bulletin Europeen sur les maladies transmissibles = European communicable disease bulletin · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 1 country.

Jayasimha Rao *Internal Medicine, Division of Infectious Disease, Carilion Medical Center, Roanoke, Virginia, USA.ORCID 0000-0002-0133-2862
Nicholas K Stornelli *Division of Infectious Disease, Virginia Tech Carilion School of Medicine, Roanoke, Virginia, USA.
Nathan A EversonDivision of Infectious Disease, Virginia Tech Carilion School of Medicine, Roanoke, Virginia, USA.ORCID 0000-0002-8000-8453
Lauren F McDanielDivision of Infectious Disease, Virginia Tech Carilion School of Medicine, Roanoke, Virginia, USA.ORCID 0000-0001-5360-8552
Mariana Gomez De La EspriellaInternal Medicine, Division of Infectious Disease, Carilion Medical Center, Roanoke, Virginia, USA.ORCID 0000-0001-8963-9959
Jason R FaulhaberInternal Medicine, Division of Infectious Disease, Carilion Medical Center, Roanoke, Virginia, USA.
S Michelle ToddDepartment of Biomedical Sciences and Pathobiology, VA-MD College of Veterinary Medicine, Virginia Tech, Blacksburg, Virginia, USA.ORCID 0000-0001-7799-9500
Kevin K LahmersDepartment of Biomedical Sciences and Pathobiology, VA-MD College of Veterinary Medicine, Virginia Tech, Blacksburg, Virginia, USA.ORCID 0000-0002-5290-3426
Roderick V JensenDepartment of Biological Sciences, Virginia Tech, Blacksburg, Virginia, USA.ORCID 0000-0002-3055-4296
Carilion Clinic · USCarilion Roanoke Memorial Hospital · USVirginia–Maryland College of Veterinary Medicine · USVirginia Tech · US

Funding

Division of Infectious Diseases, Carilion ClinicFDA CVM Vet-LIRN Veterinary Diagnostic Laboratory Program Infrastructure GrantVT | Fralin Life Science Institute, Virginia Polytechnic Institute and State University (VT)
6 · The paper itself

Abstract

We report the complete genome sequence of a clinical isolate of Providencia stuartii strain CMC-4104, isolated from a splenic abscess. Oxford Nanopore Technologies (ONT) and Illumina sequencing reads were assembled using Geneious to generate a 4,504,925-bp circular chromosome containing multiple copies of the NDM-1 and PER-1 genes in a genomic resistance island.

Identifiers

PMID35924937
PMCPMC9476899
OpenAlexW4289844122

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.