Evidence map›Paper›PMID 35924750›Full record

ArticleEvolution & development2022

Characterizing the genetic basis of trait evolution in the Mexican cavefish.

Camila Oliva, Nicole K Hinz, Wayne Robinson, Alexys M Barrett Thompson, Julianna Booth, Lina M Crisostomo, Samantha Zanineli, Maureen Tanner, Evan Lloyd, Morgan O'Gorman and 8 more

Abstract read
In one paragraph

Article in Evolution & development, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Mutations in the albinism genebioRxiv : the preprint server for biology · 2024
    Article
  6. Article
  7. Article
  8. Asiatic acid inOpen veterinary journal · 2023
    Article
  9. Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors.

Camila OlivaNIH U-RISE Program, Florida Atlantic University, Jupiter, Florida, USA.
Nicole K HinzDepartment of Biology, Barnard College, New York, New York, USA.
Wayne RobinsonNIH U-RISE Program, Florida Atlantic University, Jupiter, Florida, USA.
Alexys M Barrett ThompsonNIH U-RISE Program, Florida Atlantic University, Jupiter, Florida, USA.
Julianna BoothNIH U-RISE Program, Florida Atlantic University, Jupiter, Florida, USA.
Lina M CrisostomoNIH U-RISE Program, Florida Atlantic University, Jupiter, Florida, USA.
Samantha ZanineliNIH U-RISE Program, Florida Atlantic University, Jupiter, Florida, USA.
Maureen TannerNIH U-RISE Program, Florida Atlantic University, Jupiter, Florida, USA.
Evan LloydJupiter Life Science Initiative, Florida Atlantic University, Jupiter, Florida, USA.
Morgan O'GormanJupiter Life Science Initiative, Florida Atlantic University, Jupiter, Florida, USA.
Brittnee McDoleJupiter Life Science Initiative, Florida Atlantic University, Jupiter, Florida, USA.
Alexandra PazJupiter Life Science Initiative, Florida Atlantic University, Jupiter, Florida, USA.
Rob KozolJupiter Life Science Initiative, Florida Atlantic University, Jupiter, Florida, USA.
Elizabeth B BrownJupiter Life Science Initiative, Florida Atlantic University, Jupiter, Florida, USA.
Johanna E KowalkoJupiter Life Science Initiative, Florida Atlantic University, Jupiter, Florida, USA.
Yaouen FilyJupiter Life Science Initiative, Florida Atlantic University, Jupiter, Florida, USA.
Erik R DuboueJupiter Life Science Initiative, Florida Atlantic University, Jupiter, Florida, USA.
Alex C KeeneJupiter Life Science Initiative, Florida Atlantic University, Jupiter, Florida, USA.ORCID 0000-0001-6118-5537

Funding

Understanding complex trait architecture through population genomicsR01GM127872 · NIGMS · UNIVERSITY OF MINNESOTA · PI KEENE, ALEX C, MCGAUGH, SUZANNE · 2018 to 2021
$1.7M
U-RISE at Florida Atlantic UniversityT34GM136486 · NIGMS · FLORIDA ATLANTIC UNIVERSITY · PI DUBOUE, ERIK ROLANDO, FRAZIER, EVELYN · 2020 to 2024
$1.4M
NIGMS NIH HHS R01 GM127872NIGMS NIH HHS T34 GM136486NSF 1923372
6 · The paper itself

Abstract

Evolution in response to a change in ecology often coincides with various morphological, physiological, and behavioral traits. For most organisms little is known about the genetic and functional relationship between evolutionarily derived traits, representing a critical gap in our understanding of adaptation. The Mexican tetra, Astyanax mexicanus, consists of largely independent populations of fish that inhabit at least 30 caves in Northeast Mexico, and a surface fish population, that inhabit the rivers of Mexico and Southern Texas. The recent application of molecular genetic approaches combined with behavioral phenotyping have established A. mexicanus as a model for studying the evolution of complex traits. Cave populations of A. mexicanus are interfertile with surface populations and have evolved numerous traits including eye degeneration, insomnia, albinism, and enhanced mechanosensory function. The interfertility of different populations from the same species provides a unique opportunity to define the genetic relationship between evolved traits and assess the co-evolution of behavioral and morphological traits with one another. To define the relationships between morphological and behavioral traits, we developed a pipeline to test individual fish for multiple traits. This pipeline confirmed differences in locomotor activity, prey capture, and startle reflex between surface and cavefish populations. To measure the relationship between traits, individual F2 hybrid fish were characterized for locomotor behavior, prey-capture behavior, startle reflex, and morphological attributes. Analysis revealed an association between body length and slower escape reflex, suggesting a trade-off between increased size and predator avoidance in cavefish. Overall, there were few associations between individual behavioral traits, or behavioral and morphological traits, suggesting independent genetic changes underlie the evolution of the measured behavioral and morphological traits. Taken together, this approach provides a novel system to identify genetic underpinnings of naturally occurring variation in morphological and behavioral traits.

Indexed as

Biological EvolutionCharacidaeAdaptation, PhysiologicalAnimalsMexicoPhenotypebehaviorcavefishdevelopment

Identifiers

PMID35924750
PMCPMC9786752

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.