Evidence map›Paper›PMID 35920807›Full record

ArticleeLife2022

Structural motifs for subtype-specific pH-sensitive gating of vertebrate otopetrin proton channels.

Bochuan Teng, Joshua P Kaplan, Ziyu Liang, Zachary Krieger, Yu-Hsiang Tu, Batuujin Burendei, Andrew B Ward, Emily R Liman

Open access · goldAbstract read
In one paragraph

Article in eLife, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
3.4field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 32 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Developmental regulation of intestinalbioRxiv : the preprint server for biology · 2025
    Article
  6. Article
  7. Paramutation-Like Behavior of Genic piRNA-Producing Loci inInternational journal of molecular sciences · 2025
    Article
  8. Article
  9. Article
  10. Review
  11. Article
  12. Article
  13. Article
  14. The ion channels of endomembranes.Physiological reviews · 2024
    Review
  15. Article
  16. Transcendent Aspects of Proton Channels.Annual review of physiology · 2024
    Review
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Bochuan Teng *Section of Neurobiology, Department of Biological Sciences, University of Southern California, Los Angeles, United States.
Joshua P Kaplan *Section of Neurobiology, Department of Biological Sciences, University of Southern California, Los Angeles, United States.
Ziyu LiangSection of Neurobiology, Department of Biological Sciences, University of Southern California, Los Angeles, United States.
Zachary KriegerSection of Neurobiology, Department of Biological Sciences, University of Southern California, Los Angeles, United States.
Yu-Hsiang TuDiabetes, Endocrinology, and Obesity Branch, National Institute of Diabetes and Digestive and Kidney Diseases, National Institutes of Health, Bethesda, United States.
Batuujin BurendeiDepartment of Integrative Structural and Computational Biology, The Scripps Research Institute, La Jolla, United States.
Andrew B WardDepartment of Integrative Structural and Computational Biology, The Scripps Research Institute, La Jolla, United States.ORCID 0000-0001-7153-3769
Emily R LimanSection of Neurobiology, Department of Biological Sciences, University of Southern California, Los Angeles, United States.ORCID 0000-0003-4765-5496
University of Southern California · USScripps Research Institute · USNational Institutes of Health · US

Funding

Role of the proton channel OTOP1 in taste transductionR01DC013741 · NIDCD · UNIVERSITY OF SOUTHERN CALIFORNIA · PI Sue C. Kinnamon, EMILY R. LIMAN · 2014 to 2026
$5.7M
Cellular Physiology of Otopetrin Proton ChannelsR01GM131234 · NIGMS · UNIVERSITY OF SOUTHERN CALIFORNIA · PI LIMAN, EMILY R. · 2019 to 2022
$1.4M
NIDCD NIH HHS R01 DC013741NIGMS NIH HHS R01 GM131234
6 · The paper itself

Abstract

Otopetrin (OTOP) channels are proton-selective ion channels conserved among vertebrates and invertebrates, with no structural similarity to other ion channels. There are three vertebrate OTOP channels (OTOP1, OTOP2, and OTOP3), of which one (OTOP1) functions as a sour taste receptor. Whether extracellular protons gate OTOP channels, in addition to permeating them, was not known. Here, we compare the functional properties of the three murine OTOP channels using patch-clamp recording and cytosolic pH microfluorimetry. We find that OTOP1 and OTOP3 are both steeply activated by extracellular protons, with thresholds of pH

Indexed as

ProtonsVertebratesAnimalsHydrogen-Ion ConcentrationInvertebratesIon ChannelsMembrane ProteinsMiceIon ChannelsMembrane Proteinsotopetrin 1 protein, mouseProtonsacid-sensingion channel gatingion transportligand-gatingmolecular biophysicsneuroscienceotop1otop2otop3otopetrinph regulationproton channelstructural biologytastevestibular

Identifiers

PMID35920807
PMCPMC9348849
OpenAlexW4289704799

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.