Evidence map›Paper›PMID 35920794›Full record

ArticlePlant physiology2022

POPEYE intercellular localization mediates cell-specific iron deficiency responses.

DurreShahwar Muhammad, Natalie M Clark, Samiul Haque, Cranos M Williams, Rosangela Sozzani, Terri A Long

Open access · bronzeAbstract read
In one paragraph

Article in Plant physiology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
3.2field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 15 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

DurreShahwar MuhammadDepartment of Plant and Microbial Biology, North Carolina State University, Raleigh, North Carolina 27695, USA.ORCID 0000-0003-2474-4058
Natalie M ClarkDepartment of Plant and Microbial Biology, North Carolina State University, Raleigh, North Carolina 27695, USA.ORCID 0000-0003-0988-321X
Samiul HaqueDepartment of Electrical and Computer Engineering, North Carolina State University, Raleigh, North Carolina 27695, USA.ORCID 0000-0002-0217-8713
Cranos M WilliamsDepartment of Electrical and Computer Engineering, North Carolina State University, Raleigh, North Carolina 27695, USA.ORCID 0000-0002-0477-9707
Rosangela SozzaniDepartment of Plant and Microbial Biology, North Carolina State University, Raleigh, North Carolina 27695, USA.ORCID 0000-0003-3316-2367
Terri A LongDepartment of Plant and Microbial Biology, North Carolina State University, Raleigh, North Carolina 27695, USA.ORCID 0000-0001-7846-0195
North Carolina State University · US

Funding

Biotechnology and Biological Sciences Research Council
6 · The paper itself

Abstract

Plants must tightly regulate iron (Fe) sensing, acquisition, transport, mobilization, and storage to ensure sufficient levels of this essential micronutrient. POPEYE (PYE) is an iron responsive transcription factor that positively regulates the iron deficiency response, while also repressing genes essential for maintaining iron homeostasis. However, little is known about how PYE plays such contradictory roles. Under iron-deficient conditions, pPYE:GFP accumulates in the root pericycle while pPYE:PYE-GFP is localized to the nucleus in all Arabidopsis (Arabidopsis thaliana) root cells, suggesting that PYE may have cell-specific dynamics and functions. Using scanning fluorescence correlation spectroscopy and cell-specific promoters, we found that PYE-GFP moves between different cells and that the tendency for movement corresponds with transcript abundance. While localization to the cortex, endodermis, and vasculature is required to manage changes in iron availability, vasculature and endodermis localization of PYE-GFP protein exacerbated pye-1 defects and elicited a host of transcriptional changes that are detrimental to iron mobilization. Our findings indicate that PYE acts as a positive regulator of iron deficiency response by regulating iron bioavailability differentially across cells, which may trigger iron uptake from the surrounding rhizosphere and impact root energy metabolism.

Indexed as

ArabidopsisArabidopsis ProteinsIron DeficienciesBasic Helix-Loop-Helix ProteinsGene Expression Regulation, PlantIronPlant RootsArabidopsis ProteinsBasic Helix-Loop-Helix ProteinsIron

Identifiers

PMID35920794
PMCPMC9614487
OpenAlexW4289595432

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.