Evidence map›Paper›PMID 35920020›Full record

ArticleThe EMBO journal2022

Elp3-mediated codon-dependent translation promotes mTORC2 activation and regulates macrophage polarization.

Dawei Chen, Ivan Nemazanyy, Olivier Peulen, Kateryna Shostak, Xinyi Xu, Seng Chuan Tang, Caroline Wathieu, Silvia Turchetto, Sylvia Tielens, Laurent Nguyen and 8 more

Open access · hybridAbstract read
In one paragraph

Article in The EMBO journal, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed, 1 pooled it
2.9field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 1 synthesis or guideline pooled it, 36 citations in OpenAlex.

  1. Pooled it
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  16. Mitochondrial metabolism and cancer therapeutic innovation.Signal transduction and targeted therapy · 2025
    Review
  17. IGF2BP2: an mCellular & molecular biology letters · 2025
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors at 3 institutions in 3 countries.

Dawei ChenInterdisciplinary Cluster for Applied Genoproteomics, University of Liege, Liege, Belgium.ORCID 0000-0002-2541-4512
Ivan NemazanyyPlatform for Metabolic Analyses, Structure Fédérative de Recherche Necker, INSERM US24/CNRS UMS 3633, Paris, France.ORCID 0000-0001-8080-839X
Olivier PeulenInterdisciplinary Cluster for Applied Genoproteomics, University of Liege, Liege, Belgium.ORCID 0000-0002-6933-0134
Kateryna ShostakInterdisciplinary Cluster for Applied Genoproteomics, University of Liege, Liege, Belgium.
Xinyi XuInterdisciplinary Cluster for Applied Genoproteomics, University of Liege, Liege, Belgium.
Seng Chuan TangInterdisciplinary Cluster for Applied Genoproteomics, University of Liege, Liege, Belgium.
Caroline WathieuInterdisciplinary Cluster for Applied Genoproteomics, University of Liege, Liege, Belgium.ORCID 0000-0003-1874-3657
Silvia TurchettoInterdisciplinary Cluster for Applied Genoproteomics, University of Liege, Liege, Belgium.
Sylvia TielensInterdisciplinary Cluster for Applied Genoproteomics, University of Liege, Liege, Belgium.
Laurent NguyenInterdisciplinary Cluster for Applied Genoproteomics, University of Liege, Liege, Belgium.ORCID 0000-0002-8560-3008
Pierre CloseInterdisciplinary Cluster for Applied Genoproteomics, University of Liege, Liege, Belgium.
Christophe DesmetInterdisciplinary Cluster for Applied Genoproteomics, University of Liege, Liege, Belgium.
Sebastian KleinInstitute for Pathology-University Hospital Cologne, Köln, Germany.ORCID 0000-0002-2188-9377
Alexandra FlorinInstitute for Pathology-University Hospital Cologne, Köln, Germany.
Reinhard BüttnerInstitute for Pathology-University Hospital Cologne, Köln, Germany.ORCID 0000-0001-8806-4786
Georgios PetrellisLaboratory of Immunology-Vaccinology, Fundamental and Applied Research in Animals and Health (FARAH), University of Liege, Liège, Belgium.ORCID 0000-0002-6444-4378
Benjamin Dewals *Laboratory of Immunology-Vaccinology, Fundamental and Applied Research in Animals and Health (FARAH), University of Liege, Liège, Belgium.ORCID 0000-0003-1497-0799
Alain Chariot *Interdisciplinary Cluster for Applied Genoproteomics, University of Liege, Liege, Belgium.ORCID 0000-0002-1691-4347
University of Liège · BEUniversity Hospital Cologne · DECentre National de la Recherche Scientifique · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Macrophage polarization is a process whereby macrophages acquire distinct effector states (M1 or M2) to carry out multiple and sometimes opposite functions. We show here that translational reprogramming occurs during macrophage polarization and that this relies on the Elongator complex subunit Elp3, an enzyme that modifies the wobble uridine base U34 in cytosolic tRNAs. Elp3 expression is downregulated by classical M1-activating signals in myeloid cells, where it limits the production of pro-inflammatory cytokines via FoxO1 phosphorylation, and attenuates experimental colitis in mice. In contrast, alternative M2-activating signals upregulate Elp3 expression through a PI3K- and STAT6-dependent signaling pathway. The metabolic reprogramming linked to M2 macrophage polarization relies on Elp3 and the translation of multiple candidates, including the mitochondrial ribosome large subunit proteins Mrpl3, Mrpl13, and Mrpl47. By promoting translation of its activator Ric8b in a codon-dependent manner, Elp3 also regulates mTORC2 activation. Elp3 expression in myeloid cells further promotes Wnt-driven tumor initiation in the intestine by maintaining a pool of tumor-associated macrophages exhibiting M2 features. Collectively, our data establish a functional link between tRNA modifications, mTORC2 activation, and macrophage polarization.

Indexed as

Histone AcetyltransferasesMacrophage ActivationSignal TransductionAnimalsCodonMacrophagesMechanistic Target of Rapamycin Complex 2MiceCodonElp3 protein, mouseHistone AcetyltransferasesMechanistic Target of Rapamycin Complex 2Elp3macrophage polarizationmitochondrial translationmTORC2tRNA modifications

Identifiers

PMID35920020
PMCPMC9475509
OpenAlexW4289517810

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.