Evidence map›Paper›PMID 35919071›Full record

ArticleNeuro-oncology advances

Rapid intraoperative diagnosis of pediatric brain tumors using Raman spectroscopy: A machine learning approach.

Rashad Jabarkheel, Chi-Sing Ho, Adrian J Rodrigues, Michael C Jin, Jonathon J Parker, Kobina Mensah-Brown, Derek Yecies, Gerald A Grant

Open access · goldAbstract read
In one paragraph

Article in Neuro-oncology advances. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
7.1field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 28 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Review
  7. Article
  8. Article
  9. Article
  10. Review
  11. Raman Spectroscopy as a Tool to Study the Pathophysiology of Brain Diseases.International journal of molecular sciences · 2023
    Review
  12. Neurooncology: 2023 update.Free neuropathology · 2023
    Article
  13. Artificial intelligence applications in pediatric oncology diagnosis.Exploration of targeted anti-tumor therapy · 2023
    Review
  14. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Rashad JabarkheelDepartment of Neurosurgery, Stanford University, Stanford, California, USA.ORCID https://orcid.org/0000-0002-7643-2622
Chi-Sing HoDepartment of Applied Physics, Stanford University, Stanford, California, USA.
Adrian J RodriguesDepartment of Neurosurgery, Stanford University, Stanford, California, USA.
Michael C JinDepartment of Neurosurgery, Stanford University, Stanford, California, USA.
Jonathon J ParkerDepartment of Neurosurgery, Stanford University, Stanford, California, USA.
Kobina Mensah-BrownDepartment of Neurosurgery, University of Pennsylvania, Philadelphia, Pennsylvania, USA.
Derek YeciesDepartment of Neurosurgery, Stanford University, Stanford, California, USA.ORCID https://orcid.org/0000-0001-8534-4651
Gerald A GrantDepartment of Neurosurgery, Stanford University, Stanford, California, USA.
Stanford University · USUniversity of Pennsylvania · USDuke University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background: Surgical resection is a mainstay in the treatment of pediatric brain tumors to achieve tissue diagnosis and tumor debulking. While maximal safe resection of tumors is desired, it can be challenging to differentiate normal brain from neoplastic tissue using only microscopic visualization, intraoperative navigation, and tactile feedback. Here, we investigate the potential for Raman spectroscopy (RS) to accurately diagnose pediatric brain tumors intraoperatively. Methods: Using a rapid acquisition RS device, we intraoperatively imaged fresh ex vivo brain tissue samples from 29 pediatric patients at the Lucile Packard Children's Hospital between October 2018 and March 2020 in a prospective fashion. Small tissue samples measuring 2-4 mm per dimension were obtained with each individual tissue sample undergoing multiple unique Raman spectra acquisitions. All tissue samples from which Raman spectra were acquired underwent individual histopathology review. A labeled dataset of 678 unique Raman spectra gathered from 160 samples was then used to develop a machine learning model capable of (1) differentiating normal brain from tumor tissue and (2) normal brain from low-grade glioma (LGG) tissue. Results: Trained logistic regression model classifiers were developed using our labeled dataset. Model performance was evaluated using leave-one-patient-out cross-validation. The area under the curve (AUC) of the receiver-operating characteristic (ROC) curve for our tumor vs normal brain model was 0.94. The AUC of the ROC curve for LGG vs normal brain was 0.91. Conclusions: Our work suggests that RS can be used to develop a machine learning-based classifier to differentiate tumor vs non-tumor tissue during resection of pediatric brain tumors.

Indexed as

machine learningpediatric brain tumorsRaman spectroscopy

Identifiers

PMID35919071
PMCPMC9341441
OpenAlexW4288036853

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.