Evidence map›Paper›PMID 35918812›Full record

ArticleJournal of the National Cancer Institute2022

Discoidin Domain Receptor-Driven Gene Signatures as Markers of Patient Response to Anti-PD-L1 Immune Checkpoint Therapy.

Sungyong You, Minhyung Kim, Xen Ping Hoi, Yu Cheng Lee, Li Wang, David Spetzler, Jim Abraham, Dan Magee, Prerna Jain, Matthew D Galsky and 2 more

Open access · greenAbstract read
In one paragraph

Article in Journal of the National Cancer Institute, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.2field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 12 citations in OpenAlex.

  1. Review
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  9. Bladder cancer.Nature reviews. Disease primers · 2023
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 5 institutions in 2 countries.

Sungyong YouDepartment of Surgery, Cedars-Sinai Medical Center, Los Angeles, CA, USA.ORCID 0000-0003-3513-1783
Minhyung KimDepartment of Surgery, Cedars-Sinai Medical Center, Los Angeles, CA, USA.
Xen Ping HoiSamuel Oschin Comprehensive Cancer Institute, Los Angeles, CA, USA.ORCID 0000-0001-7610-7291
Yu Cheng LeeGraduate Institute of Medical Sciences, Taipei Medical University, Taipei, Taiwan.
Li WangDepartment of Medicine, Division of Hematology Oncology, Icahn School of Medicine at Mount Sinai, Tisch Cancer Institute, New York, NY, USA.
David SpetzlerCaris Life Sciences, Irving, TX, USA.
Jim AbrahamCaris Life Sciences, Irving, TX, USA.ORCID 0000-0001-5038-1735
Dan MageeCaris Life Sciences, Irving, TX, USA.
Prerna JainTempus, Chicago, IL, USA.ORCID 0000-0002-7281-1369
Matthew D GalskyDepartment of Medicine, Division of Hematology Oncology, Icahn School of Medicine at Mount Sinai, Tisch Cancer Institute, New York, NY, USA.
Keith Syson ChanSamuel Oschin Comprehensive Cancer Institute, Los Angeles, CA, USA.
Dan TheodorescuDepartment of Surgery, Cedars-Sinai Medical Center, Los Angeles, CA, USA.ORCID 0000-0002-8708-8206
Cedars-Sinai Medical Center · USCaris Life Sciences (United States) · USTisch Cancer InstituteTaipei Medical University · TWTempus Labs (United States) · US

Funding

Regulation and Targeting of CD24 in Bladder CancerR01CA075115 · NCI · UNIVERSITY OF VIRGINIA CHARLOTTESVILLE · PI THEODORESCU, DAN · 2003 to 2024
$7.0M
Distinct Tumor and Metastatic Collagen Microenvironments: Divergent Targeting ApproachesR01CA175397 · NCI · METHODIST HOSPITAL RESEARCH INSTITUTE · PI CHAN, KEITH SYSON · 2013 to 2025
$4.8M
Targeting tumor repopulation and the immune microenvironment to overcome chemoresistanceR01CA255609 · NCI · METHODIST HOSPITAL RESEARCH INSTITUTE · PI CHAN, KEITH SYSON · 2021 to 2025
$2.2M
MECHANISMS OF BLADDER CANCER INVANSIONR29CA075115 · NCI · UNIVERSITY OF VIRGINIA CHARLOTTESVILLE · PI THEODORESCU, DAN · 1997 to 2001
$217k
NCI NIH HHS R01 CA075115NCI NIH HHS R01 CA175397NCI NIH HHS R01 CA255609
6 · The paper itself

Abstract

backgroundAnti-programmed cell death 1 (anti-PD-1) and PD ligand 1 (PD-L1) immune checkpoint therapies (ICTs) provided durable responses only in a subset of cancer patients. Thus, biomarkers are needed to predict nonresponders and offer them alternative treatments. We recently implicated discoidin domain receptor tyrosine kinase 2 (DDR2) as a contributor to anti-PD-1 resistance in animal models; therefore, we sought to investigate whether this gene family may provide ICT response prediction.

methodsWe assessed mRNA expression of DDR2 and its family member DDR1. Transcriptome analysis of bladder cancer (BCa) models in which DDR1 and 2 were perturbed was used to derive DDR1- and DDR2-driven signature scores. DDR mRNA expression and gene signature scores were evaluated using BCa-The Cancer Genome Atlas (n = 259) and IMvigor210 (n = 298) datasets, and their relationship to BCa subtypes, pathway enrichment, and immune deconvolution analyses was performed. The potential of DDR-driven signatures to predict ICT response was evaluated and independently validated through a statistical framework in bladder and lung cancer cohorts. All statistical tests were 2-sided.

resultsDDR1 and DDR2 showed mutually exclusive gene expression patterns in human tumors. DDR2high BCa exhibited activation of immune pathways and a high immune score, indicative of a T-cell-inflamed phenotype, whereas DDR1high BCa exhibited a non-T-cell-inflamed phenotype. In IMvigor210 cohort, tumors with high DDR1 (hazard ratio [HR] = 1.53, 95% confidence interval [CI] = 1.16 to 2.06; P = .003) or DDR2 (HR = 1.42, 95% CI = 1.01 to 1.92; P = .04) scores had poor overall survival. Of note, DDR2high tumors from IMvigor210 and CheckMate 275 (n = 73) cohorts exhibited poorer overall survival (HR = 1.56, 95% CI = 1.20 to 2.06; P < .001) and progression-free survival (HR = 1.77 95%, CI = 1.05 to 3.00; P = .047), respectively. This result was validated in independent cancer datasets.

conclusionsThese findings implicate DDR1 and DDR2 driven signature scores in predicting ICT response.

Indexed as

Discoidin Domain Receptor 2Lung NeoplasmsAnimalsB7-H1 AntigenBiomarkersDiscoidin Domain ReceptorsHumansLigandsReceptor Protein-Tyrosine KinasesReceptors, MitogenRNA, MessengerB7-H1 AntigenBiomarkersCD274 protein, humanDiscoidin Domain Receptor 2Discoidin Domain ReceptorsLigandsReceptor Protein-Tyrosine KinasesReceptors, MitogenRNA, Messenger

Identifiers

PMID35918812
PMCPMC9552307
OpenAlexW4289516690

What OpenQuestion holds

Textmetadata
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.