Evidence map›Paper›PMID 35918447›Full record

ArticleScientific reports2022

PILRA polymorphism modifies the effect of APOE4 and GM17 on Alzheimer's disease risk.

Karin Lopatko Lindman, Caroline Jonsson, Bodil Weidung, Jan Olsson, Janardan P Pandey, Dmitry Prokopenko, Rudolph E Tanzi, Göran Hallmans, Sture Eriksson, Fredrik Elgh and 1 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
3.4field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 22 citations in OpenAlex.

  1. Review
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  5. Article
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  8. Review
  9. Alzheimer's Disease Sequencing Project release 4 whole genome sequencing dataset.Alzheimer's & dementia : the journal of the Alzheimer's Association · 2025
    Article
  10. Article
  11. Article
  12. Alzheimer's Disease Sequencing Project Release 4 Whole Genome Sequencing Dataset.medRxiv : the preprint server for health sciences · 2024
    Article
  13. Article
  14. Article
  15. Alzheimer's Disease: An Updated Overview of Its Genetics.International journal of molecular sciences · 2023
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 2 countries.

Karin Lopatko LindmanDepartment of Community Medicine and Rehabilitation, Geriatric Medicine, Umeå University, 901 85, Umeå, Sweden. karin.lopatko.lindman@umu.se.
Caroline JonssonDepartment of Community Medicine and Rehabilitation, Geriatric Medicine, Umeå University, 901 85, Umeå, Sweden.
Bodil WeidungDepartment of Community Medicine and Rehabilitation, Geriatric Medicine, Umeå University, 901 85, Umeå, Sweden.
Jan OlssonDepartment of Clinical Microbiology, Umeå University, Umeå, Sweden.
Janardan P PandeyDepartment of Microbiology and Immunology, Medical University of South Carolina, Charleston, USA.
Dmitry ProkopenkoGenetics and Aging Unit, Department of Neurology, McCance Center for Brain Health, Massachusetts General Hospital, Boston, MA, USA.
Rudolph E TanziGenetics and Aging Unit, Department of Neurology, McCance Center for Brain Health, Massachusetts General Hospital, Boston, MA, USA.
Göran HallmansDepartment of Public Health and Clinical Medicine, Umeå University, Umeå, Sweden.
Sture ErikssonDepartment of Community Medicine and Rehabilitation, Geriatric Medicine, Umeå University, 901 85, Umeå, Sweden.
Fredrik ElghDepartment of Clinical Microbiology, Umeå University, Umeå, Sweden.
Hugo LövheimDepartment of Community Medicine and Rehabilitation, Geriatric Medicine, Umeå University, 901 85, Umeå, Sweden.
Umeå University · SEHarvard University · USMedical University of South Carolina · USUppsala University · SE

Funding

National Centralized Repository for Alzheimer's Disease and Related Dementias (NCRAD)U24AG021886 · NIA · INDIANA UNIV-PURDUE UNIV AT INDIANAPOLIS · PI TATIANA M. FOROUD · 2002 to 2026
$119.8M
NIA NIH HHS U24 AG021886
6 · The paper itself

Abstract

PILRA (rs1859788 A > G) has been suggested to be a protective variant for Alzheimer's disease (AD) and is an entry co-receptor for herpes simplex virus-1. We conducted a nested case-control study of 360 1:1-matched AD subjects. Interactions between the PILRA-A allele, APOE risk variants (ε3/ε4 or ε4/ε4) and GM17 for AD risk were modelled. The associations were cross-validated using two independent whole-genome sequencing datasets. We found negative interactions between PILRA-A and GM17 (OR 0.72, 95% CI 0.52-1.00) and between PILRA-A and APOE risk variants (OR 0.56, 95% CI 0.32-0.98) in the discovery dataset. In the replication cohort, a joint effect of PILRA and PILRA × GM 17/17 was observed for the risk of developing AD (p .02). Here, we report a negative effect modification by PILRA on APOE and GM17 high-risk variants for future AD risk in two independent datasets. This highlights the complex genetics of AD.

Indexed as

Alzheimer DiseaseApolipoprotein E4AllelesApolipoproteins ECase-Control StudiesGenotypeHumansMembrane GlycoproteinsPolymorphism, GeneticReceptors, ImmunologicApolipoprotein E4Apolipoproteins EMembrane GlycoproteinsPILRA protein, humanReceptors, Immunologic

Identifiers

PMID35918447
PMCPMC9346002
OpenAlexW4289443668

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.