Evidence map›Paper›PMID 35918328›Full record

ArticleNature communications2022

Distinctive roles of translesion polymerases DinB1 and DnaE2 in diversification of the mycobacterial genome through substitution and frameshift mutagenesis.

Pierre Dupuy, Shreya Ghosh, Oyindamola Adefisayo, John Buglino, Stewart Shuman, Michael S Glickman

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
3.0field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 20 citations in OpenAlex.

  1. Article
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  4. Journal of bacteriology · 2026
    Review
  5. Review
  6. Article
  7. Article
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  10. An additional proofreader contributes to DNA replication fidelity in mycobacteria.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  11. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Pierre DupuyImmunology Program, Sloan Kettering Institute, New York, NY, 10065, USA.ORCID 0000-0002-7451-304X
Shreya GhoshMolecular Biology Program, Sloan-Kettering Institute, New York, NY, 10065, USA.ORCID 0000-0002-1709-8011
Oyindamola AdefisayoImmunology Program, Sloan Kettering Institute, New York, NY, 10065, USA.
John BuglinoImmunology Program, Sloan Kettering Institute, New York, NY, 10065, USA.
Stewart ShumanMolecular Biology Program, Sloan-Kettering Institute, New York, NY, 10065, USA.
Michael S GlickmanImmunology Program, Sloan Kettering Institute, New York, NY, 10065, USA. glickmam@mskcc.org.ORCID 0000-0001-7918-5164
Kettering University · USCornell University · US

Funding

X-RAY CRYSTALLOGRAPHYP30CA008748 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI Hongbiao Carl Lekaye · 1985 to 2026
$347.4M
Novel pathway of DNA inter-strand crosslink repair in mycobacteriaR01AI064693 · NIAID · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI Michael S Glickman, Stewart H Shuman · 2005 to 2026
$11.1M
NCI NIH HHS P30 CA008748NIAID NIH HHS R01 AI064693
6 · The paper itself

Abstract

Antibiotic resistance of Mycobacterium tuberculosis is exclusively a consequence of chromosomal mutations. Translesion synthesis (TLS) is a widely conserved mechanism of DNA damage tolerance and mutagenesis, executed by translesion polymerases such as DinBs. In mycobacteria, DnaE2 is the only known agent of TLS and the role of DinB polymerases is unknown. Here we demonstrate that, when overexpressed, DinB1 promotes missense mutations conferring resistance to rifampicin, with a mutational signature distinct from that of DnaE2, and abets insertion and deletion frameshift mutagenesis in homo-oligonucleotide runs. DinB1 is the primary mediator of spontaneous -1 frameshift mutations in homo-oligonucleotide runs whereas DnaE2 and DinBs are redundant in DNA damage-induced -1 frameshift mutagenesis. These results highlight DinB1 and DnaE2 as drivers of mycobacterial genome diversification with relevance to antimicrobial resistance and host adaptation.

Indexed as

Frameshift MutationMycobacterium tuberculosisBacterial ProteinsDNA DamageDNA RepairDNA ReplicationMutagenesisMutation, MissenseNucleotidyltransferasesOligonucleotidesBacterial ProteinsNucleotidyltransferasesOligonucleotides

Identifiers

PMID35918328
PMCPMC9346131
OpenAlexW4289521334

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.