Evidence map›Paper›PMID 35917319›Full record

ArticlePloS one2022

MRN-dependent and independent pathways for recruitment of TOPBP1 to DNA double-strand breaks.

Katrina Montales, Kenna Ruis, Howard Lindsay, W Matthew Michael

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.6field-weighted citation impact, top 36% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 2 countries.

Katrina MontalesDepartment of Biological Sciences, Molecular and Computational Biology Section, University of Southern California, Los Angeles, California, United States of America.
Kenna RuisDepartment of Biological Sciences, Molecular and Computational Biology Section, University of Southern California, Los Angeles, California, United States of America.
Howard LindsayFaculty of Health and Medicine, Lancaster Medical School, Lancaster University, Lancaster, United Kingdom.ORCID 0000-0001-9102-4881
W Matthew MichaelDepartment of Biological Sciences, Molecular and Computational Biology Section, University of Southern California, Los Angeles, California, United States of America.ORCID 0000-0002-8535-5796
University of Southern California · USLancaster University · GB

Funding

Mechanistic analysis of ATR signalingR01GM122887 · NIGMS · UNIVERSITY OF SOUTHERN CALIFORNIA · PI MICHAEL, MATTHEW · 2017 to 2020
$1.3M
NIGMS NIH HHS R01 GM122887
6 · The paper itself

Abstract

Ataxia Telangiectasia mutated and RAD3-related (ATR) kinase is activated by DNA replication stress and also by various forms of DNA damage, including DNA double-strand breaks (DSBs). Recruitment to sites of damage is insufficient for ATR activation as one of two known ATR activators, either topoisomerase II-binding protein (TOPBP1) or Ewing's tumor-associated antigen 1, must also be present for signaling to initiate. Here, we employ our recently established DSB-mediated ATR activation in Xenopus egg extract (DMAX) system to examine how TOPBP1 is recruited to DSBs, so that it may activate ATR. We report that TOPBP1 is only transiently present at DSBs, with a half-life of less than 10 minutes. We also examined the relationship between TOPBP1 and the MRE11-RAD50-NBS1 (MRN), CtBP interacting protein (CtIP), and Ataxia Telangiectasia mutated (ATM) network of proteins. Loss of MRN prevents CtIP recruitment to DSBs, and partially inhibits TOPBP1 recruitment. Loss of CtIP has no impact on either MRN or TOPBP1 recruitment. Loss of ATM kinase activity prevents CtIP recruitment and enhances MRN and TOPBP1 recruitment. These findings demonstrate that there are MRN-dependent and independent pathways that recruit TOPBP1 to DSBs for ATR activation. Lastly, we find that both the 9-1-1 complex and MDC1 are dispensable for TOPBP1 recruitment to DSBs.

Indexed as

Ataxia TelangiectasiaDNA Breaks, Double-StrandedAtaxia Telangiectasia Mutated ProteinsCarrier ProteinsCell Cycle ProteinsDNADNA-Binding ProteinsDNA Repair EnzymesHumansMRE11 Homologue ProteinNuclear ProteinsProtein Serine-Threonine KinasesTumor Suppressor ProteinsAtaxia Telangiectasia Mutated ProteinsCarrier ProteinsCell Cycle ProteinsDNADNA-Binding ProteinsDNA Repair EnzymesMRE11 Homologue ProteinNuclear ProteinsProtein Serine-Threonine KinasesTOPBP1 protein, humanTumor Suppressor Proteins

Identifiers

PMID35917319
PMCPMC9345342
OpenAlexW4289596104

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.