Evidence map›Paper›PMID 35916043›Full record

ReviewJournal of medical virology2022

When 3D genome technology meets viral infection, including SARS-CoV-2.

Weizheng Liang, Shuangqing Wang, Hao Wang, Xiushen Li, Qingxue Meng, Yan Zhao, Chunfu Zheng

Open access · greenAbstract readReview
In one paragraph

Review in Journal of medical virology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
2.1field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 11 citations in OpenAlex.

  1. Article
  2. Article
  3. Applying 3D Genome Technology in Virology Research.Methods in molecular biology (Clifton, N.J.) · 2025
    Article
  4. Article
  5. Article
  6. Review
  7. Article
  8. Article
  9. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 3 countries.

Weizheng LiangCentral Laboratory, The First Affiliated Hospital of Hebei North University, Zhangjiakou, China.
Shuangqing WangDepartment of Neurology, Shenzhen University General Hospital, Shenzhen University, Shenzhen, Guangdong Province, China.
Hao WangDepartment of Obstetrics and Gynecology, Shenzhen University General Hospital, Shenzhen, Guangdong, China.
Xiushen LiDepartment of Obstetrics and Gynecology, Shenzhen University General Hospital, Shenzhen, Guangdong, China.
Qingxue MengCentral Laboratory, The First Affiliated Hospital of Hebei North University, Zhangjiakou, China.
Yan ZhaoDepartment of Mathematics and Computer Science, Free University Berlin, Berlin, Germany.
Chunfu ZhengDepartment of Immunology, School of Basic Medical Sciences, Fujian Medical University, Fuzhou, China.ORCID 0000-0002-8797-1322
Shenzhen University · CNFujian Medical University · CNFreie Universität Berlin · DEHebei North University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Mammalian chromosomes undergo varying degrees of compression to form three-dimensional genome structures. These three-dimensional structures undergo dynamic and precise chromatin interactions to achieve precise spatial and temporal regulation of gene expression. Most eukaryotic DNA viruses can invade their genomes into the nucleus. However, it is still poorly understood how the viral genome is precisely positioned after entering the host cell nucleus to find the most suitable location and whether it can specifically interact with the host genome to hijack the host transcriptional factories or even integrate into the host genome to complete its transcription and replication rapidly. Chromosome conformation capture technology can reveal long-range chromatin interactions between different chromosomal sites in the nucleus, potentially providing a reference for viral DNA-host chromatin interactions. This review summarized the research progress on the three-dimensional interaction between virus and host genome and the impact of virus integration into the host genome on gene transcription regulation, aiming to provide new insights into chromatin interaction and viral gene transcription regulation, laying the foundation for the treatment of infectious diseases.

Indexed as

COVID-19SARS-CoV-2AnimalsChromatinDNA, ViralGenome, ViralMammalsTechnologyChromatinDNA, Viral3D genomechromatin interactionHBVHi-CSARS-CoV-2viral infection

Identifiers

PMID35916043
PMCPMC9538846
OpenAlexW4289518381

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.