Evidence map›Paper›PMID 35915170›Full record

ArticleApplied microbiology and biotechnology2022

PCR-tips for rapid diagnosis of bacterial pathogens.

Claudia Gimenez, Mirna L Sánchez, Hugo A Valdez, María E Rodriguez, Mariano Grasselli

Open access · bronzeAbstract read
In one paragraph

Article in Applied microbiology and biotechnology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
0.1field-weighted citation impact, top 57% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 1 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Claudia GimenezDepartamento de Ciencia y Tecnología, Laboratorio de Materiales Biotecnológicos (LaMaBio), Universidad Nacional de Quilmes, Bernal, Buenos Aires, Argentina.
Mirna L SánchezDepartamento de Ciencia y Tecnología, Laboratorio de Materiales Biotecnológicos (LaMaBio), Universidad Nacional de Quilmes, Bernal, Buenos Aires, Argentina.
Hugo A ValdezLaboratorio de Microbiología Celular e Inmunomecanismos, CINDEFI | Centro de Investigación y Desarrollo en Fermentaciones Industriales Facultad de Ciencias Exactas (UNLP), La Plata, Argentina.
María E RodriguezLaboratorio de Microbiología Celular e Inmunomecanismos, CINDEFI | Centro de Investigación y Desarrollo en Fermentaciones Industriales Facultad de Ciencias Exactas (UNLP), La Plata, Argentina.
Mariano GrasselliDepartamento de Ciencia y Tecnología, Laboratorio de Materiales Biotecnológicos (LaMaBio), Universidad Nacional de Quilmes, Bernal, Buenos Aires, Argentina. mariano.grasselli@unq.edu.ar.ORCID http://orcid.org/0000-0003-0927-5943
National University of Quilmes · AR

Funding

Universidad Nacional de Quilmes PUNQ 1311/19
6 · The paper itself

Abstract

Micropipette tips are currently among the most used disposable devices in bioresearch and development laboratories. Their main application is the fractionation of solutions. New functionalities have recently been added to this device, widening their applications. This paper analyzed disposable micropipette tips as reagent holders of PCR reagents. PCR has become a prevalent and often indispensable technique in biological laboratories for various applications, such as the detection of coronavirus and other infectious diseases. A functional micropipette tip was implemented to simplify PCR analysis and reduce the contamination chances of deoxynucleotides and specific primers. This disposable device is prepared by tip coating processes of reagents, using polyvinyl alcohol polymer and additives. The coated layer is optimized to load and release PCR reagents efficiently. As a proof of concept, we show that the detection of Bordetella pertussis, the etiological agent of whooping cough whose diagnostic relies on PCR, can be quickly done using practical-functional tips. This device is an excellent example of testing the functionality and contribution of molecular diagnostic PCR tips. KEY POINTS: • Functional micropipette tips are prepared by coating with dNTPs and primers. • Functional tips are used to replace dNTPs and primers in the PCR master mix. • PCR diagnostic of Bordetella pertussis is performed using functional tips.

Indexed as

Bordetella pertussisWhooping CoughDNA, BacterialDNA PrimersHumansPolymerase Chain ReactionDNA, BacterialDNA PrimersB. pertussis detectionDisposable tipsPCRReagent fractionation

Identifiers

PMID35915170
PMCPMC9343218
OpenAlexW4289333399

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.