Evidence map›Paper›PMID 35914146›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2022

Mechanistic details of CRISPR-associated transposon recruitment and integration revealed by cryo-EM.

Jung-Un Park, Amy Wei-Lun Tsai, Tiffany H Chen, Joseph E Peters, Elizabeth H Kellogg

Open access · hybridAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
3.1field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 36 citations in OpenAlex.

  1. Article
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  15. Review
  16. Article
  17. A CRISPR-Cas-associated transposon system for genome editing inApplied and environmental microbiology · 2024
    Article
  18. CRISPR technologies for genome, epigenome and transcriptome editing.Nature reviews. Molecular cell biology · 2024
    Review
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Jung-Un ParkDepartment of Molecular Biology and Genetics, Cornell University, Ithaca, NY 14853.ORCID 0000-0002-0269-7142
Amy Wei-Lun TsaiDepartment of Molecular Biology and Genetics, Cornell University, Ithaca, NY 14853.ORCID 0000-0001-8856-617X
Tiffany H ChenDepartment of Molecular Biology and Genetics, Cornell University, Ithaca, NY 14853.
Joseph E PetersDepartment of Microbiology, Cornell University, Ithaca, NY 14853.ORCID 0000-0001-8309-3297
Elizabeth H KelloggDepartment of Molecular Biology and Genetics, Cornell University, Ithaca, NY 14853.
Cornell University · US

Funding

CRISPR/Cas-directed transposition in Tn7-like elementsR01GM129118 · NIGMS · CORNELL UNIVERSITY · PI PETERS, JOSEPH E · 2019 to 2022
$1.2M
Molecular Basis of Genome Organization and Integrity Using Cryo-EMR00GM124463 · NIGMS · CORNELL UNIVERSITY · PI KELLOGG, ELIZABETH · 2019 to 2021
$747k
Building a Comprehensive Discovery System for Understanding Bacterial Multidrug Resistance and Pathogenesis Using Tn7-like ElementsR21AI148941 · NIAID · CORNELL UNIVERSITY · PI PETERS, JOSEPH E · 2020 to 2021
$400k
Towards an understanding of telomere end protection: Cryo-EM studies of shelterin structure and functionK99GM124463 · NIGMS · UNIVERSITY OF CALIFORNIA BERKELEY · PI KELLOGG, ELIZABETH · 2017 to 2018
$98k
NIAID NIH HHS R21 AI148941NIGMS NIH HHS K99 GM124463NIGMS NIH HHS R00 GM124463NIGMS NIH HHS R01 GM129118
6 · The paper itself

Abstract

CRISPR-associated transposons (CASTs) are Tn7-like elements that are capable of RNA-guided DNA integration. Although structural data are known for nearly all core transposition components, the transposase component, TnsB, remains uncharacterized. Using cryo-electron microscopy (cryo-EM) structure determination, we reveal the conformation of TnsB during transposon integration for the type V-K CAST system from

Indexed as

Clustered Regularly Interspaced Short Palindromic RepeatsCyanobacteriaDNA Transposable ElementsTransposasesBacterial ProteinsCryoelectron MicroscopyDNA-Binding ProteinsBacterial ProteinsDNA-Binding ProteinsDNA Transposable ElementsTransposasesCRISPR-associated transposoncryo-EMTnsBtransposase structure

Identifiers

PMID35914146
PMCPMC9371665
OpenAlexW4289262202

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.