Evidence map›Paper›PMID 35914128›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2022

Chemical interference with DSIF complex formation lowers synthesis of mutant huntingtin gene products and curtails mutant phenotypes.

Ning Deng, Yun-Yun Wu, Yanan Feng, Wen-Chieh Hsieh, Jen-Shin Song, Yu-Shiuan Lin, Ya-Hsien Tseng, Wan-Jhu Liao, Yi-Fan Chu, Yu-Cheng Liu and 7 more

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.2field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 12 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Decoding Nucleotide Repeat Expansion Diseases: Novel Insights fromInternational journal of molecular sciences · 2024
    Review
  5. Article
  6. Article
  7. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 5 institutions in 2 countries.

Ning DengDepartment of Genetics, Stanford University School of Medicine, Stanford, CA 94305.ORCID 0000-0002-1321-5508
Yun-Yun WuTaiwan International Graduate Program in Molecular Medicine, National Yang Ming Chiao Tung University and Academia Sinica, Taipei, 11529, Taiwan.
Yanan FengDepartment of Genetics, Stanford University School of Medicine, Stanford, CA 94305.
Wen-Chieh HsiehInstitute of Biochemistry and Molecular Biology, National Yang Ming Chiao Tung University, Taipei, 11221, Taiwan.
Jen-Shin SongInstitute of Biotechnology and Pharmaceutical Research, National Health Research Institutes, Zhunan, 35053, Taiwan.
Yu-Shiuan LinInstitute of Biochemistry and Molecular Biology, National Yang Ming Chiao Tung University, Taipei, 11221, Taiwan.
Ya-Hsien TsengInstitute of Biochemistry and Molecular Biology, National Yang Ming Chiao Tung University, Taipei, 11221, Taiwan.
Wan-Jhu LiaoInstitute of Biochemistry and Molecular Biology, National Yang Ming Chiao Tung University, Taipei, 11221, Taiwan.
Yi-Fan ChuDepartment of Life Science and Institute of Genome Sciences, National Yang Ming Chiao Tung University, Taipei, 11221, Taiwan.
Yu-Cheng LiuInstitute of Biomedical Informatics, National Yang Ming Chiao Tung University, Taipei, 11221, Taiwan.ORCID 0000-0003-4669-2586
En-Cheng ChangInstitute of Biochemistry and Molecular Biology, National Yang Ming Chiao Tung University, Taipei, 11221, Taiwan.ORCID 0000-0003-3828-3918
Chia-Rung LiuInstitute of Biochemistry and Molecular Biology, National Yang Ming Chiao Tung University, Taipei, 11221, Taiwan.
Sheh-Yi SheuDepartment of Life Science and Institute of Genome Sciences, National Yang Ming Chiao Tung University, Taipei, 11221, Taiwan.ORCID 0000-0002-4416-4336
Ming-Tsan SuDepartment of Life Science, National Taiwan Normal University, Taipei, 11677, Taiwan.
Hung-Chih KuoInstitute of Cellular and Organismic Biology, Academia Sinica, Taipei, 11529, Taiwan.
Stanley N CohenDepartment of Genetics, Stanford University School of Medicine, Stanford, CA 94305.ORCID 0000-0002-8960-1819
Tzu-Hao ChengTaiwan International Graduate Program in Molecular Medicine, National Yang Ming Chiao Tung University and Academia Sinica, Taipei, 11529, Taiwan.ORCID 0000-0003-2329-7356
National Yang Ming Chiao Tung University · TWStanford University · USInstitute of Cellular and Organismic Biology, Academia Sinica · TWNational Health Research Institutes · TWNational Taiwan Normal University · TW

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Earlier work has shown that siRNA-mediated reduction of the SUPT4H or SUPT5H proteins, which interact to form the DSIF complex and facilitate transcript elongation by RNA polymerase II (RNAPII), can decrease expression of mutant gene alleles containing nucleotide repeat expansions differentially. Using luminescence and fluorescence assays, we identified chemical compounds that interfere with the SUPT4H-SUPT5H interaction and then investigated their effects on synthesis of mRNA and protein encoded by mutant alleles containing repeat expansions in the huntingtin gene (

Indexed as

AzauridineHuntingtin ProteinHuntington DiseaseMutant ProteinsMutationNuclear ProteinsPhenotypeRepressor ProteinsTranscriptional Elongation FactorsAllelesAnimalsCells, CulturedDisease Models, AnimalDNA Repeat ExpansionDrosophila melanogasterHumansAzauridineHTT protein, humanHuntingtin ProteinMutant ProteinsNuclear ProteinsRepressor ProteinsSUPT4H1 protein, humanSUPT5H protein, humanTranscriptional Elongation FactorsDSIFHuntington’s diseasenucleotide repeatsSpt4SUPT4H

Identifiers

PMID35914128
PMCPMC9371670
OpenAlexW4289262572

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.