Evidence map›Paper›PMID 35913162›Full record

ArticlemBio2022

Impact of SARS-CoV-2 Spike Mutations on Its Activation by TMPRSS2 and the Alternative TMPRSS13 Protease.

Annelies Stevaert, Ria Van Berwaer, Cato Mestdagh, Julie Vandeput, Els Vanstreels, Valerie Raeymaekers, Manon Laporte, Lieve Naesens

Open access · goldAbstract read
In one paragraph

Article in mBio, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.1field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 11 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 2 countries.

Annelies StevaertKU Leuven, Department of Microbiology, Immunology and Transplantation, Rega Institute, Leuven, Belgium.ORCID 0000-0003-3316-2826
Ria Van BerwaerKU Leuven, Department of Microbiology, Immunology and Transplantation, Rega Institute, Leuven, Belgium.
Cato MestdaghKU Leuven, Department of Microbiology, Immunology and Transplantation, Rega Institute, Leuven, Belgium.
Julie VandeputKU Leuven, Department of Microbiology, Immunology and Transplantation, Rega Institute, Leuven, Belgium.
Els VanstreelsKU Leuven, Department of Microbiology, Immunology and Transplantation, Rega Institute, Leuven, Belgium.ORCID 0000-0002-7814-8035
Valerie RaeymaekersKU Leuven, Department of Microbiology, Immunology and Transplantation, Rega Institute, Leuven, Belgium.
Manon LaporteKU Leuven, Department of Microbiology, Immunology and Transplantation, Rega Institute, Leuven, Belgium.ORCID 0000-0001-5708-1321
Lieve NaesensKU Leuven, Department of Microbiology, Immunology and Transplantation, Rega Institute, Leuven, Belgium.ORCID 0000-0001-9742-9302
Rega Institute for Medical Research · BE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The continuous emergence of new variants of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) urges better understanding of the functional motifs in the spike (S) protein and their tolerance to mutations. Here, we focused on the S2' motif, which, during virus entry, requires cleavage by a host cell protease to release the fusion peptide. Though belonging to an immunogenic region, the SARS-CoV-2 S2' motif (811-KPSKR-815) has shown hardly any variation, with its three basic (K/R) residues being >99.99% conserved thus far. By creating a series of mutant pseudoviruses bearing the spikes of Wuhan-Hu-1, its G614 mutant or the Delta and Omicron variants, we show that residue K

Indexed as

COVID-19SARS-CoV-2HumansMembrane ProteinsMutationPeptide HydrolasesSerine EndopeptidasesSpike Glycoprotein, CoronavirusVirus InternalizationMembrane ProteinsPeptide HydrolasesSerine EndopeptidasesSpike Glycoprotein, Coronavirusspike protein, SARS-CoV-2TMPRSS13 protein, humanTMPRSS2 protein, humancleavagehuman coronavirus 229EmutationproteaseSARS-CoV-2spike proteinTMPRSS13TMPRSS2

Identifiers

PMID35913162
PMCPMC9426466
OpenAlexW4289339615

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.