Evidence map›Paper›PMID 35912688›Full record

ArticleMolecular genetics & genomic medicine2022

Detection of pericentric inversion with breakpoint in DMD by whole genome sequencing.

Ann-Kathrin Zaum, Indrajit Nanda, Wolfram Kress, Simone Rost

Open access · goldAbstract read
In one paragraph

Article in Molecular genetics & genomic medicine, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.4field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 18 citations in OpenAlex.

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  8. Stochasticity in genetics and gene regulation.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2024
    Review
  9. Article
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  11. Whole-Genome Sequencing Identified New Structural Variations in theInternational journal of molecular sciences · 2023
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Ann-Kathrin ZaumDepartment of Human Genetics, University of Würzburg, Würzburg, Germany.ORCID 0000-0002-3100-1415
Indrajit NandaDepartment of Human Genetics, University of Würzburg, Würzburg, Germany.
Wolfram KressDepartment of Human Genetics, University of Würzburg, Würzburg, Germany.
Simone RostDepartment of Human Genetics, University of Würzburg, Würzburg, Germany.
University of Würzburg · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundDystrophinopathies caused by variants in the DMD gene are a well-studied muscle disease. The most common type of variant in DMD are large deletions. Very rarely reported forms of variants are chromosomal translocations, inversions and deep intronic variants (DIVs) because they are not detectable by standard diagnostic techniques (sequencing of coding sequence, copy number variant detection). This might be the reason that some clinically and histologically proven dystrophinopathy cases remain unsolved.

methodsWe used whole genome sequencing (WGS) to screen the entire DMD gene for variants in one of two brothers suffering from typical muscular dystrophy with strongly elevated creatine kinase levels.

resultsAlthough a pathogenic DIV could not be detected, we were able to identify a pericentric inversion with breakpoints in DMD intron 44 and Xq13.3, which could be confirmed by Sanger sequencing in the index as well as in his brother and mother. As this variation affects a major part of DMD it is most likely disease causing.

conclusionOur findings elucidate that WGS is capable of detecting large structural rearrangements and might be suitable for the genetic diagnostics of dystrophinopathies in the future. In particular, inversions might be a more frequent cause for dystrophinopathies as anticipated and should be considered in genetically unsolved dystrophinopathy cases.

Indexed as

DystrophinMuscular Dystrophy, DuchenneChromosome InversionCreatine KinaseHumansIntronsMaleWhole Genome SequencingCreatine KinaseDystrophinchromosome inversionDuchenne muscular dystrophydystrophingenetic diagnosticswhole genome sequencing

Identifiers

PMID35912688
PMCPMC9544221
OpenAlexW4289202344

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.