Evidence map›Paper›PMID 35911504›Full record

ArticleCommunications chemistry2022

Specific intracellular signature of SARS-CoV-2 infection using confocal Raman microscopy.

Hamideh Salehi, Anuradha Ramoji, Said Mougari, Peggy Merida, Aymeric Neyret, Jurgen Popp, Branka Horvat, Delphine Muriaux, Frederic Cuisinier

Open access · goldAbstract read
In one paragraph

Article in Communications chemistry, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.8field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 8 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 2 countries.

Hamideh Salehi *LBN, University of Montpellier, Montpellier, France.ORCID 0000-0001-7051-8110
Anuradha Ramoji *Friedrich-Schiller-University Jena, Institute of Physical Chemistry and Abbe Center of Photonics (IPC), Helmholtzweg 4, D-07743 Jena, Germany.ORCID 0000-0003-2723-6614
Said MougariCIRI, International Center for Infectiology Research, INSERM U1111, CNRS UMR5308, Université de Lyon, Université Claude Bernard Lyon, École Normale Supérieure de Lyon, Lyon, France.
Peggy MeridaInstitute of Research in Infectiology of Montpellier (IRIM), University of Montpellier, UMR9004 CNRS Montpellier, France.
Aymeric NeyretCEMIPAI, University of Montpellier, UMS3725 CNRS Montpellier, France.
Jurgen PoppFriedrich-Schiller-University Jena, Institute of Physical Chemistry and Abbe Center of Photonics (IPC), Helmholtzweg 4, D-07743 Jena, Germany.
Branka HorvatCIRI, International Center for Infectiology Research, INSERM U1111, CNRS UMR5308, Université de Lyon, Université Claude Bernard Lyon, École Normale Supérieure de Lyon, Lyon, France.ORCID 0000-0003-0578-7765
Delphine MuriauxInstitute of Research in Infectiology of Montpellier (IRIM), University of Montpellier, UMR9004 CNRS Montpellier, France.
Frederic CuisinierLBN, University of Montpellier, Montpellier, France.ORCID 0000-0001-6870-0490
Centre National de la Recherche Scientifique · FRHelmholtz Institute Jena · DEUniversité Claude Bernard Lyon 1 · FRUniversité de Montpellier · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

SARS-CoV-2 infection remains spread worldwide and requires a better understanding of virus-host interactions. Here, we analyzed biochemical modifications due to SARS-CoV-2 infection in cells by confocal Raman microscopy. Obtained results were compared with the infection with another RNA virus, the measles virus. Our results have demonstrated a virus-specific Raman molecular signature, reflecting intracellular modification during each infection. Advanced data analysis has been used to distinguish non-infected versus infected cells for two RNA viruses. Further, classification between non-infected and SARS-CoV-2 and measles virus-infected cells yielded an accuracy of 98.9 and 97.2 respectively, with a significant increase of the essential amino-acid tryptophan in SARS-CoV-2-infected cells. These results present proof of concept for the application of Raman spectroscopy to study virus-host interaction and to identify factors that contribute to the efficient SARS-CoV-2 infection and may thus provide novel insights on viral pathogenesis, targets of therapeutic intervention and development of new COVID-19 biomarkers.

Indexed as

Bioanalytical chemistryBiophysical chemistrySARS-CoV-2

Identifiers

PMID35911504
PMCPMC9311350
OpenAlexW4287509860

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.