Evidence map›Paper›PMID 35911061›Full record

ReviewEpigenetics insights2022

Emerging Themes in Mechanisms of Tumorigenesis by SWI/SNF Subunit Mutation.

Cheyenne A Jones, William P Tansey, April M Weissmiller

Open access · bronzeAbstract readReview
In one paragraph

Review in Epigenetics insights, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
2.4field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 29 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Cheyenne A JonesDepartment of Biology, Middle Tennessee State University, Murfreesboro, TN, USA.ORCID https://orcid.org/0000-0002-4806-8130
William P TanseyDepartment of Cell and Developmental Biology, Vanderbilt University School of Medicine, Nashville, TN, USA.
April M WeissmillerDepartment of Biology, Middle Tennessee State University, Murfreesboro, TN, USA.ORCID https://orcid.org/0000-0003-4505-0530
Middle Tennessee State University · USVanderbilt University · US

Funding

The MYC-SWI/SNF connection in rhabdoid tumorsR01CA247833 · NCI · VANDERBILT UNIVERSITY · PI TANSEY, WILLIAM PATRICK · 2020 to 2024
$1.8M
NCI NIH HHS R01 CA247833
6 · The paper itself

Abstract

The SWI/SNF chromatin remodeling complex uses the energy of ATP hydrolysis to alter contacts between DNA and nucleosomes, allowing regions of the genome to become accessible for biological processes such as transcription. The SWI/SNF chromatin remodeler is also one of the most frequently altered protein complexes in cancer, with upwards of 20% of all cancers carrying mutations in a SWI/SNF subunit. Intense studies over the last decade have probed the molecular events associated with SWI/SNF dysfunction in cancer and common themes are beginning to emerge in how tumor-associated SWI/SNF mutations promote malignancy. In this review, we summarize current understanding of SWI/SNF complexes, their alterations in cancer, and what is known about the impact of these mutations on tumor-relevant transcriptional events. We discuss how enhancer dysregulation is a common theme in SWI/SNF mutant cancers and describe how resultant alterations in enhancer and super-enhancer activity conspire to block development and differentiation while promoting stemness and self-renewal. We also identify a second emerging theme in which SWI/SNF perturbations intersect with potent oncoprotein transcription factors AP-1 and MYC to drive malignant transcriptional programs.

Indexed as

AP-1ARID1ABRG1chromatin accessibilitychromatin remodelingenhancersMYConcogeneSNF5SWI/SNFtumor suppressor

Identifiers

PMID35911061
PMCPMC9329810
OpenAlexW4288013680

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.