Evidence map›Paper›PMID 35910847›Full record

ArticleOxidative medicine and cellular longevity2022

Identification of Nine M6A-Related Long Noncoding RNAs as Prognostic Signatures Associated with Oxidative Stress in Oral Cancer Based on Data from The Cancer Genome Atlas.

Li Shan, Ye Lu, Yihua Song, Xiaoli Zhu, Cheng-Cheng Xiang, Er-Dong Zuo, Xu Cheng

RetractedOpen access · hybridAbstract readRetracted Publication
In one paragraph

Article in Oxidative medicine and cellular longevity, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It has been retracted, and should not be counted. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.9field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 10 citations in OpenAlex.

  1. Article
  2. Biological biomarkers of oral cancer.Periodontology 2000 · 2024
    Review
  3. Article
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Li ShanDepartment of Hematology and Oncology, Soochow University Affiliated Taicang Hospital (the First People's Hospital of Taicang), Jiangsu 215400, China.ORCID https://orcid.org/0000-0001-5882-2240
Ye LuSuzhou Medical College of Soochow University/Soochow University Affiliated Taicang Hospital, China.ORCID https://orcid.org/0000-0001-9337-8333
Yihua SongDepartment of Stomatology Affiliated Hospital of Nantong University, Nantong University, Nantong, Jiangsu, China.
Xiaoli ZhuDepartment of Hematology and Oncology, Soochow University Affiliated Taicang Hospital (the First People's Hospital of Taicang), Jiangsu 215400, China.ORCID https://orcid.org/0000-0003-2910-9328
Cheng-Cheng XiangDepartment of Hematology and Oncology, Soochow University Affiliated Taicang Hospital (the First People's Hospital of Taicang), Jiangsu 215400, China.
Er-Dong ZuoDepartment of Hematology and Oncology, Soochow University Affiliated Taicang Hospital (the First People's Hospital of Taicang), Jiangsu 215400, China.
Xu ChengDepartment of Hematology and Oncology, Soochow University Affiliated Taicang Hospital (the First People's Hospital of Taicang), Jiangsu 215400, China.ORCID https://orcid.org/0000-0001-5611-4689
Soochow University · CNNantong University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Objective: Although the expression of long noncoding RNAs (lncRNAs) and N6-methyladenosine (M6A) is correlated with different tumors, it remains unclear how M6A-related lncRNA functioning affects the initiation and progression of oral squamous cell carcinoma (OSCC). Materials and Methods: Gene expression and clinical data were retrieved from The Cancer Genome Atlas. The prognostic value of M6A-related lncRNAs was determined using univariate Cox regression analyses. Gene set enrichment analysis of OSCC patient clusters revealed the pathways that elucidate the mechanism. Furthermore, a risk-based model was established. The difference in the overall survival (OS) between groups, including low-/high-risk groups, was determined by Kaplan-Meier analysis. Relationships among immune cells, clusters, clinicopathological characteristics, and risk scores were explored. Results: Among 1,080 M6A-related lncRNAs, 36 were prognosis-related. Patients with OSCC were divided into two clusters. T stage and the pathological grade were noticeably lower in cluster 2 than in cluster 1. Epithelial-mesenchymal transition showed greater enrichment in cluster 1. Nine hub M6A-related lncRNAs were identified for the model of risk score for predicting OSCC prognosis. The OS was longer in patients with a low-risk score than in patients with a high-risk score. The risk score was an independent prognostic factor of OSCC and was associated with the infiltration of different immune cells. T stages and the American Joint Committee on Cancer (AJCC) stages were more advanced in the high-risk score group than in the low-risk score group. Finally, expression correlation analysis showed that the risk score is associated with the expression of oxidative stress markers. Conclusion: M6A-related lncRNAs play an important role in OSCC progression. Immune cell infiltration was related to the risk score model in OSCC and could accurately predict OSCC prognosis.

Indexed as

Carcinoma, Squamous CellMouth NeoplasmsOxidative StressRNA, Long NoncodingAdenineBiomarkers, TumorGene Expression Regulation, NeoplasticHead and Neck NeoplasmsHumansMethyltransferasesPrognosisSquamous Cell Carcinoma of Head and Neck6-methyladenineAdenineBiomarkers, TumorMethyltransferasesRNA, Long Noncoding

Identifiers

PMID35910847
PMCPMC9337974
OpenAlexW4286602850

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.