Evidence map›Paper›PMID 35910200›Full record

ArticleFrontiers in genetics2022

Construction and Verification of a Fibroblast-Related Prognostic Signature Model for Colon Cancer.

Zhe Zhao, Wenqi Li, LiMeng Zhu, Bei Xu, Yudong Jiang, Nan Ma, LiQun Liu, Jie Qiu, Min Zhang

Open access · goldAbstract read
In one paragraph

Article in Frontiers in genetics, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
2.6field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 18 citations in OpenAlex.

  1. Article
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  9. Identification ofTranslational cancer research · 2023
    Article
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  11. Epigenetic regulation of cancer-associated fibroblast heterogeneity.Biochimica et biophysica acta. Reviews on cancer · 2023
    Review
  12. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Zhe ZhaoZhengzhou KingMed Center for Clinical Laboratory Co. Ltd., Zhengzhou, China.
Wenqi LiDepartment of Newborn Infants, Children's Hospital of Nanjing Medical University, Nanjing, China.
LiMeng ZhuZhengzhou KingMed Center for Clinical Laboratory Co. Ltd., Zhengzhou, China.
Bei XuZhengzhou KingMed Center for Clinical Laboratory Co. Ltd., Zhengzhou, China.
Yudong JiangDepartment of General Surgery, Zhongshan Hospital, Fudan University, Shanghai, China.
Nan MaZhengzhou KingMed Center for Clinical Laboratory Co. Ltd., Zhengzhou, China.
LiQun LiuZhengzhou KingMed Center for Clinical Laboratory Co. Ltd., Zhengzhou, China.
Jie QiuDepartment of Newborn Infants, Children's Hospital of Nanjing Medical University, Nanjing, China.
Min ZhangZhengzhou KingMed Center for Clinical Laboratory Co. Ltd., Zhengzhou, China.
Kingmed Diagnostics · CNSecond Affiliated Hospital of Nanjing Medical University · CNSun Yat-sen University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Traditionally, cancer-associated fibroblasts (CAFs), an essential component of tumor microenvironment, were exert a crucial part in colon cancer progression. In this study, single-cell RNA-sequencing (scRNA-seq) data from 23 and bulk RNA-seq data from 452 colon cancer patients were extracted from the GEO database and TCGA-COAD and GEO databases, respectively. From single-cell analysis, 825 differentially expressed genes (DEGs) in CAFs were identified between each pair of six newly defined CAFs, named enCAF, adCAF, vaCAF, meCAF, erCAF, and cyCAF. Cell communication analysis with the iTALK package showed communication relationship between CAFs, including cell autocrine, cytokine, and growth factor subtypes, such as receptor-ligand pairs of

Indexed as

cancer-associated fibroblasts (CAFs)colon cancerdrug sensitivityimmune infiltrationsingle-cell RNA-sequencing(scRNA-seq)

Identifiers

PMID35910200
PMCPMC9329609
OpenAlexW4285386229

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.