Evidence map›Paper›PMID 35909774›Full record

ArticleFrontiers in plant science2022

Artificial Neural Network for Discrimination and Classification of Tropical Soybean Genotypes of Different Relative Maturity Groups.

Lígia de Oliveira Amaral, Glauco Vieira Miranda, Bruno Henrique Pedroso Val, Alice Pereira Silva, Alyce Carla Rodrigues Moitinho, Sandra Helena Unêda-Trevisoli

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Article in Frontiers in plant science, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

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4citing papers in PubMed
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4 citing papers in PubMed.

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5 · Who and what money

Authors and funding

6 authors.

Lígia de Oliveira AmaralLaboratory of Biotechnology and Plant Breending, Department of Agricultural Sciences, São Paulo State University - UNESP/FCAV, Jaboticabal, Brazil.
Glauco Vieira MirandaDepartment of Agronomy Coordination, Federal Technological University of Paraná, Curitiba, Brazil.
Bruno Henrique Pedroso ValLaboratory of Biotechnology and Plant Breending, Department of Agricultural Sciences, São Paulo State University - UNESP/FCAV, Jaboticabal, Brazil.
Alice Pereira SilvaLaboratory of Biotechnology and Plant Breending, Department of Agricultural Sciences, São Paulo State University - UNESP/FCAV, Jaboticabal, Brazil.
Alyce Carla Rodrigues MoitinhoLaboratory of Biotechnology and Plant Breending, Department of Agricultural Sciences, São Paulo State University - UNESP/FCAV, Jaboticabal, Brazil.
Sandra Helena Unêda-TrevisoliLaboratory of Biotechnology and Plant Breending, Department of Agricultural Sciences, São Paulo State University - UNESP/FCAV, Jaboticabal, Brazil.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Soybean has a recognized narrow genetic base that often makes it difficult to visualize available genetic and phenotypic variability and identify superior genotypes during the selection process. However, the phenotypic expression of soybean plants is highly affected by photoperiod and the cultivation of a given variety is performed in the latitude range that presents ideal conditions for its development based on its relative maturity group (RMG) for the optimization of the phenotypic expression of its genotype. Based on the above, this study aimed to evaluate the efficiency of artificial neural networks (ANNs) as a tool for the correct discrimination and classification of tropical soybean genotypes according to their relative maturity group during the population selection process with the aim of optimizing the phenotypic performance of these selected genotypes. For this purpose, three biparental populations were synthesized, one with a wide genetic variability for the RMG character obtained from the hybridization between genitors of maturity groups RMG 5 (Sub-tropical 23° LS) × RMG 9.4 (Tropical 0° LS) and two populations with a narrow variability obtained between genitors RMG 7.3 (Tropical 20° LS) × RMG 9.4 and RMG 5.3 × RMG 6.7, respectively. Criteria for comparing the developed ANN architecture with Fisher's linear and Anderson's quadratic parametric discriminant methodologies were applied to the data for the discrimination and classification of the genotypes. ANN showed an apparent error rate of less than 8.16% as well as a low influence of environmental factors, correctly classifying the genotypes in the populations even in cases of reduced genetic variability such as in the RMG 5 × RMG 6 population. In contrast, the discriminant functions were inefficient in correctly classifying the genotypes in the populations with genealogical similarity (RMG 5 × RMG 6) and wide genetic variability, with an error rate of more than 50%. Based on the results of this study, ANN can be used for the discrimination of genotypes in the initial generations of selection in breeding programs for the development of high performance cultivars for wide and reduced photoperiod amplitudes, even with fewer selection environments, more efficiently, and with fewer time and resources applied. As a result of similarity between the parents, ANN can correctly classify genotypes from populations with a narrow genetic base, in addition to pure lines and genotypes with a high degree of inbreeding.

Indexed as

apparent error ratedata miningglycine maxmachine learningphotoperiodrelative maturity

Identifiers

PMID35909774
PMCPMC9328155

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