Evidence map›Paper›PMID 35909295›Full record

ArticleThe New phytologist2022

Positive selection and heat-response transcriptomes reveal adaptive features of the Brassicaceae desert model, Anastatica hierochuntica.

Gil Eshel, Nick Duppen, Guannan Wang, Dong-Ha Oh, Yana Kazachkova, Pawel Herzyk, Anna Amtmann, Michal Gordon, Vered Chalifa-Caspi, Michelle Arland Oscar and 4 more

Open access · hybridAbstract read
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In one paragraph

Article in The New phytologist, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
14.0field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 24 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. Article
  5. Integrated bioassays and metabolomics identifyFrontiers in microbiology · 2026
    Article
  6. Adaptive Traits and Molecular Mechanisms ofPlants (Basel, Switzerland) · 2025
    Article
  7. Review
  8. Article
  9. Article
  10. Article
  11. Article
  12. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 4 institutions in 3 countries.

Gil Eshel *Albert Katz International School for Desert Studies, Ben-Gurion University of the Negev, Sde Boqer Campus, Midreshet Ben-Gurion, 8499000, Israel.ORCID 0000-0003-4648-7187
Nick Duppen *Albert Katz International School for Desert Studies, Ben-Gurion University of the Negev, Sde Boqer Campus, Midreshet Ben-Gurion, 8499000, Israel.ORCID 0000-0002-3459-6370
Guannan WangDepartment of Biological Sciences, Louisiana State University, Baton Rouge, LA, 70803, USA.ORCID 0000-0001-5277-1921
Dong-Ha OhDepartment of Biological Sciences, Louisiana State University, Baton Rouge, LA, 70803, USA.ORCID 0000-0003-1526-9814
Yana KazachkovaAlbert Katz International School for Desert Studies, Ben-Gurion University of the Negev, Sde Boqer Campus, Midreshet Ben-Gurion, 8499000, Israel.ORCID 0000-0003-3613-4177
Pawel HerzykInstitute of Molecular, Cell and Systems Biology, College of Medical, Veterinary and Life Sciences, University of Glasgow, Glasgow, G12 8QQ, UK.ORCID 0000-0002-7439-292X
Anna AmtmannInstitute of Molecular, Cell and Systems Biology, College of Medical, Veterinary and Life Sciences, University of Glasgow, Glasgow, G12 8QQ, UK.ORCID 0000-0001-8533-121X
Michal GordonBioinformatics Core Facility, The National Institute for Biotechnology in the Negev, Ben-Gurion University of the Negev, Beer-Sheva, 8410501, Israel.ORCID 0000-0002-7058-8714
Vered Chalifa-CaspiBioinformatics Core Facility, The National Institute for Biotechnology in the Negev, Ben-Gurion University of the Negev, Beer-Sheva, 8410501, Israel.ORCID 0000-0001-6030-5816
Michelle Arland OscarBlaustein Center for Scientific Cooperation, Ben-Gurion University of the Negev, Sde Boqer Campus, Midreshet Ben-Gurion, 8499000, Israel.ORCID 0000-0003-0714-5774
Shirli Bar-DavidMitrani Department of Desert Ecology, Jacob Blaustein Institutes for Desert Research, Ben-Gurion University of the Negev, Sde Boqer Campus, Midreshet Ben-Gurion, 8499000, Israel.ORCID 0000-0001-8103-041X
Amy Marshall-ColonDepartment of Plant Biology, University of Illinois at Urbana-Champaign, Urbana, IL, 61801, USA.ORCID 0000-0001-6752-4982
Maheshi DassanayakeDepartment of Biological Sciences, Louisiana State University, Baton Rouge, LA, 70803, USA.ORCID 0000-0003-3123-3731
Simon BarakFrench Associates' Institute for Agriculture and Biotechnology of Drylands, Jacob Blaustein Institutes for Desert Research, Ben-Gurion University of the Negev, Sde Boqer Campus, Midreshet Ben-Gurion, 8499000, Israel.ORCID 0000-0002-4238-4992
Ben-Gurion University of the Negev · ILLouisiana State University · USUniversity of Glasgow · GBUniversity of Illinois Urbana-Champaign · US

Funding

Biotechnology and Biological Sciences Research Council BB/R019894/1Biotechnology and Biological Sciences Research Council P17237
6 · The paper itself

Abstract

Plant adaptation to a desert environment and its endemic heat stress is poorly understood at the molecular level. The naturally heat-tolerant Brassicaceae species Anastatica hierochuntica is an ideal extremophyte model to identify genetic adaptations that have evolved to allow plants to tolerate heat stress and thrive in deserts. We generated an A. hierochuntica reference transcriptome and identified extremophyte adaptations by comparing Arabidopsis thaliana and A. hierochuntica transcriptome responses to heat, and detecting positively selected genes in A. hierochuntica. The two species exhibit similar transcriptome adjustment in response to heat and the A. hierochuntica transcriptome does not exist in a constitutive heat 'stress-ready' state. Furthermore, the A. hierochuntica global transcriptome as well as heat-responsive orthologs, display a lower basal and higher heat-induced expression than in A. thaliana. Genes positively selected in multiple extremophytes are associated with stomatal opening, nutrient acquisition, and UV-B induced DNA repair while those unique to A. hierochuntica are consistent with its photoperiod-insensitive, early-flowering phenotype. We suggest that evolution of a flexible transcriptome confers the ability to quickly react to extreme diurnal temperature fluctuations characteristic of a desert environment while positive selection of genes involved in stress tolerance and early flowering could facilitate an opportunistic desert lifestyle.

Indexed as

ArabidopsisBrassicaceaeAcclimatizationAdaptation, PhysiologicalGene Expression Regulation, PlantTranscriptomeadaptationAnastatica hierochunticaBrassicaceaedesert speciesextremophyteheat stresspositive selectiontranscriptome

Identifiers

PMID35909295
OpenAlexW4289131254

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.