Evidence map›Paper›PMID 35907093›Full record

ArticleWorld journal of microbiology & biotechnology2022

Characterization of the rare microbiome of rice paddy soil from arsenic contaminated hotspot of West Bengal and their interrelation with arsenic and other geochemical parameters.

Himadri Bose, Anumeha Saha, Rajendra Prasad Sahu, Anindya Sundar Dey, Pinaki Sar

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Article in World journal of microbiology & biotechnology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Himadri BoseDepartment of Biotechnology, Indian Institute of Technology Kharagpur, Kharagpur, West Bengal, 721302, India.
Anumeha SahaDepartment of Biotechnology, Indian Institute of Technology Kharagpur, Kharagpur, West Bengal, 721302, India.
Rajendra Prasad SahuDepartment of Biotechnology, Indian Institute of Technology Kharagpur, Kharagpur, West Bengal, 721302, India.
Anindya Sundar DeyDepartment of Biotechnology, Indian Institute of Technology Kharagpur, Kharagpur, West Bengal, 721302, India.
Pinaki SarDepartment of Biotechnology, Indian Institute of Technology Kharagpur, Kharagpur, West Bengal, 721302, India. sarpinaki@yahoo.com.ORCID http://orcid.org/0000-0001-6867-7817

Funding

Department of Science and Technology, Government of India PDF/2017/000657
6 · The paper itself

Abstract

Rare microbial taxa [bacterial and archaeal operational taxonomic units (OTUs) with mean relative abundance ≤ 0.001%] were critical for ecosystem function, yet, their identity and function remained incompletely understood, particularly in arsenic (As) contaminated rice soils. In the present study we have characterized the rare populations of the As-contaminated rice soil microbiomes from West Bengal (India) in terms of their identity, interaction and potential function. Major proportion of the OTUs (73% of total 38,289 OTUs) was represented by rare microbial taxa (henceforth mentioned as rare taxa), which covered 4.5-15.7% of the different communities. Taxonomic assignment of the rare taxa showed their affiliation to members of Gamma-, Alpha-, Delta- Proteobacteria, Actinobacteria, and Acidobacteria. SO

Indexed as

ArsenicMicrobiotaOryzaSoil PollutantsBacteriaPhylogenyRNA, Ribosomal, 16SSoilSoil MicrobiologyArsenicRNA, Ribosomal, 16SSoilSoil PollutantsArsenic biotransformationArsenic contaminationAs-Fe metabolismMicrobial diversityNitrogen cyclePaddy soilRare taxaRice

Identifiers

PMID35907093

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.