Evidence map›Paper›PMID 35906467›Full record

ArticleScientific reports2022

Molecular dynamics simulations explore effects of electric field orientations on spike proteins of SARS-CoV-2 virions.

Zhifeng Kuang, John Luginsland, Robert J Thomas, Patrick B Dennis, Nancy Kelley-Loughnane, William P Roach, Rajesh R Naik

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.6field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 12 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 1 country.

Zhifeng KuangMaterials and Manufacturing Directorate, Air Force Research Laboratory, WPAFB, Dayton, OH, 45433, USA. zig.kuang@gmail.com.ORCID 0000-0003-1969-8608
John LuginslandWork Performed With Confluent Sciences, LLC, Albuquerque, NM, 87111, USA.
Robert J Thomas711th Human Performance Wing, Air Force Research Laboratory, JBSA Fort Sam Houston, San Antonio, TX, 78234, USA.
Patrick B DennisMaterials and Manufacturing Directorate, Air Force Research Laboratory, WPAFB, Dayton, OH, 45433, USA.
Nancy Kelley-LoughnaneMaterials and Manufacturing Directorate, Air Force Research Laboratory, WPAFB, Dayton, OH, 45433, USA.
William P RoachAir Force Office of Scientific Research, Arlington, VA, 22203, USA.
Rajesh R Naik711Th Human Performance Wing, Air Force Research Laboratory, WPAFB, Dayton, OH, 45433, USA. bionanomaterials@hotmail.com.
United States Air Force Research Laboratory · US59th Medical Wing · USConfluence Life Sciences (United States) · USUnited States Air Force Office of Scientific Research · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Emergence of the severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) and its current worldwide spread have caused a pandemic of acute respiratory disease COVID-19. The virus can result in mild to severe, and even to fatal respiratory illness in humans, threatening human health and public safety. The spike (S) protein on the surface of viral membrane is responsible for viral entry into host cells. The discovery of methods to inactivate the entry of SARS-CoV-2 through disruption of the S protein binding to its cognate receptor on the host cell is an active research area. To explore other prevention strategies against the quick spread of the virus and its mutants, non-equilibrium molecular dynamics simulations have been employed to explore the possibility of manipulating the structure-activity of the SARS-CoV-2 spike glycoprotein by applying electric fields (EFs) in both the protein axial directions and in the direction perpendicular to the protein axis. We have found out the application of EFs perpendicular to the protein axis is most effective in denaturing the HR2 domain which plays critical role in viral-host membrane fusion. This finding suggests that varying irradiation angles may be an important consideration in developing EF based non-invasive technologies to inactivate the virus.

Indexed as

COVID-19SARS-CoV-2HumansMolecular Dynamics SimulationProtein BindingSpike Glycoprotein, CoronavirusVirionSpike Glycoprotein, Coronavirusspike protein, SARS-CoV-2

Identifiers

PMID35906467
PMCPMC9334739
OpenAlexW4288535726

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.