Evidence map›Paper›PMID 35904588›Full record

ArticleEuropean biophysics journal : EBJ2022

Neurotransmitter uptake of synaptic vesicles studied by X-ray diffraction.

Karlo Komorowski, Julia Preobraschenski, Marcelo Ganzella, Jette Alfken, Charlotte Neuhaus, Reinhard Jahn, Tim Salditt

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In one paragraph

Article in European biophysics journal : EBJ, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.3field-weighted citation impact, top 45% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 6 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Karlo KomorowskiInstitute for X-ray Physics, University of Göttingen, Friedrich-Hund-Platz 1, 37077, Göttingen, Germany.
Julia PreobraschenskiDepartment of Neurobiology, Max Planck Institute for Biophysical Chemistry, Am Faßberg 11, 37077, Göttingen, Germany.
Marcelo GanzellaDepartment of Neurobiology, Max Planck Institute for Biophysical Chemistry, Am Faßberg 11, 37077, Göttingen, Germany.
Jette AlfkenInstitute for X-ray Physics, University of Göttingen, Friedrich-Hund-Platz 1, 37077, Göttingen, Germany.
Charlotte NeuhausInstitute for X-ray Physics, University of Göttingen, Friedrich-Hund-Platz 1, 37077, Göttingen, Germany.
Reinhard JahnDepartment of Neurobiology, Max Planck Institute for Biophysical Chemistry, Am Faßberg 11, 37077, Göttingen, Germany.
Tim SaldittInstitute for X-ray Physics, University of Göttingen, Friedrich-Hund-Platz 1, 37077, Göttingen, Germany. tsaldit@gwdg.de.ORCID http://orcid.org/0000-0003-4636-0813
Max Planck Institute for Biophysical Chemistry · DEUniversity of Göttingen · DEGesellschaft für wissenschaftliche Datenverarbeitung mbH Göttingen · DE

Funding

Deutsche Forschungsgemeinschaft SFB 1286/A2 SB803/B01
6 · The paper itself

Abstract

The size, polydispersity, and electron density profile of synaptic vesicles (SVs) can be studied by small-angle X-ray scattering (SAXS), i.e. by X-ray diffraction from purified SV suspensions in solution. Here we show that size and shape transformations, as they appear in the functional context of these important synaptic organelles, can also be monitored by SAXS. In particular, we have investigated the active uptake of neurotransmitters, and find a mean vesicle radius increase of about 12% after the uptake of glutamate, which indicates an unusually large extensibility of the vesicle surface, likely to be accompanied by conformational changes of membrane proteins and rearrangements of the bilayer. Changes in the electron density profile (EDP) give first indications for such a rearrangement. Details of the protein structure are screened, however, by SVs polydispersity. To overcome the limitations of large ensemble averages and heterogeneous structures, we therefore propose serial X-ray diffraction by single free electron laser pulses. Using simulated data for realistic parameters, we show that this is in principle feasible, and that even spatial distances between vesicle proteins could be assessed by this approach.

Indexed as

Glutamic AcidSynaptic VesiclesBiological TransportProteinsScattering, Small AngleX-Ray DiffractionGlutamic AcidProteinsNeurotransmitter uptakeSmall angle X-ray scatteringSynaptic vesiclesSynchrotron and free electron laser techniques

Identifiers

PMID35904588
PMCPMC9463337
OpenAlexW4288489041

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.