Evidence map›Paper›PMID 35903686›Full record

ArticleFrontiers in oncology2022

Genome-wide CRISPR Screening Reveals Pyrimidine Metabolic Reprogramming in 5-FU Chronochemotherapy of Colorectal Cancer.

Ya Niu, Xinyi Fan, Yaping Wang, Jiaxin Lin, Luchun Hua, Xiaobo Li, Ruizhe Qian, Chao Lu

Open access · goldAbstract read
In one paragraph

Article in Frontiers in oncology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed, 1 pooled it
1.6field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 1 synthesis or guideline pooled it, 16 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Review
  4. Article
  5. Article
  6. Article
  7. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Ya NiuDepartment of Physiology and Pathophysiology of School of Basic Medical Sciences, Cancer Institute of Shanghai Cancer Center, Fudan University, Shanghai, China.
Xinyi FanDepartment of Physiology and Pathophysiology of School of Basic Medical Sciences, Cancer Institute of Shanghai Cancer Center, Fudan University, Shanghai, China.
Yaping WangDepartment of Surgery, Huashan Hospital, Fudan University, Shanghai, China.
Jiaxin LinDepartment of Physiology and Pathophysiology of School of Basic Medical Sciences, Cancer Institute of Shanghai Cancer Center, Fudan University, Shanghai, China.
Luchun HuaDepartment of Surgery, Huashan Hospital, Fudan University, Shanghai, China.
Xiaobo LiDepartment of Physiology and Pathophysiology of School of Basic Medical Sciences, Cancer Institute of Shanghai Cancer Center, Fudan University, Shanghai, China.
Ruizhe QianDepartment of Physiology and Pathophysiology of School of Basic Medical Sciences, Cancer Institute of Shanghai Cancer Center, Fudan University, Shanghai, China.
Chao LuDepartment of Physiology and Pathophysiology of School of Basic Medical Sciences, Cancer Institute of Shanghai Cancer Center, Fudan University, Shanghai, China.
Fudan University Shanghai Cancer Center · CNFudan University · CNHuashan Hospital · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Objective: Disruption of the circadian rhythm is associated with cancer occurrence, response to chemotherapy, and poor prognosis. Thus, using internal clock-based chronotherapy to optimize the administration time may improve the therapeutic effects of anticancer drugs while reducing the side effects. Chronotherapy with 5-fluorouracil (5-FU) has been observed in colorectal cancer (CRC) for a long time, but its effect is under controversial and the mechanism remains unclear. Methods: Genome-wide clustered regularly interspaced short palindromic repeats (CRISPR) screening and RNA-sequencing were combined to identify the potential genes or pathways involved in 5-FU chronochemotherapy. Genetic deletion or overexpression of pyrimidine metabolic pathway genes were conducted to examine cellular viability with or without 5-FU Results: Chronochemotherapeutic effects of 5-FU on CRC Conclusion: This study uncovered a new mechanism by which a core circadian gene BMAL1 increases the effectiveness of 5-FU by enhancing the expression and enzymatic activities of key genes in the pyrimidine metabolic pathway in CRC cells. The findings suggest a novel strategy for CRC chemotherapy by targeting chrono-modulated genes of the 5-FU metabolic pathway.

Indexed as

5-fluorouracilBMAL1chronochemotherapycircadian rhythmCRISPR screening

Identifiers

PMID35903686
PMCPMC9316589
OpenAlexW4285089781

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.