Evidence map›Paper›PMID 35902923›Full record

ArticleRespiratory research2022

CEBPD modulates the airway smooth muscle transcriptomic response to glucocorticoids.

Mengyuan Kan, Maoyun Sun, Xiaofeng Jiang, Avantika R Diwadkar, Vishal Parikh, Gaoyuan Cao, Eric Gebski, William Jester, Bo Lan, Reynold A Panettieri and 3 more

Open access · goldAbstract read
In one paragraph

Article in Respiratory research, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.5field-weighted citation impact, top 38% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 4 citations in OpenAlex.

  1. Review
  2. Review
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  5. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 3 institutions in 1 country.

Mengyuan KanDepartment of Biostatistics, Epidemiology and Informatics, University of Pennsylvania, 402 Blockley Hall, 423 Guardian Drive, Philadelphia, PA, 19104, USA.
Maoyun SunDepartment of Environmental Health, Harvard T.H. Chan School of Public Health, Boston, MA, USA.
Xiaofeng JiangDepartment of Environmental Health, Harvard T.H. Chan School of Public Health, Boston, MA, USA.
Avantika R DiwadkarDepartment of Biostatistics, Epidemiology and Informatics, University of Pennsylvania, 402 Blockley Hall, 423 Guardian Drive, Philadelphia, PA, 19104, USA.
Vishal ParikhRutgers Institute for Translational Medicine and Science, Rutgers University, New Brunswick, NJ, USA.
Gaoyuan CaoRutgers Institute for Translational Medicine and Science, Rutgers University, New Brunswick, NJ, USA.
Eric GebskiRutgers Institute for Translational Medicine and Science, Rutgers University, New Brunswick, NJ, USA.
William JesterRutgers Institute for Translational Medicine and Science, Rutgers University, New Brunswick, NJ, USA.
Bo LanDepartment of Environmental Health, Harvard T.H. Chan School of Public Health, Boston, MA, USA.
Reynold A PanettieriRutgers Institute for Translational Medicine and Science, Rutgers University, New Brunswick, NJ, USA.
Cynthia Koziol-WhiteRutgers Institute for Translational Medicine and Science, Rutgers University, New Brunswick, NJ, USA.
Quan LuDepartment of Environmental Health, Harvard T.H. Chan School of Public Health, Boston, MA, USA.
Blanca E HimesDepartment of Biostatistics, Epidemiology and Informatics, University of Pennsylvania, 402 Blockley Hall, 423 Guardian Drive, Philadelphia, PA, 19104, USA. bhimes@pennmedicine.upenn.edu.
Rutgers, The State University of New Jersey · USHarvard University · USUniversity of Pennsylvania · US

Funding

Translational Research Support CoreP30ES005022 · NIEHS · UNIV OF MED/DENT NJ-R W JOHNSON MED SCH · PI BRIAN T BUCKLEY · 1988 to 2026
$47.4M
Translational Research Support CoreP30ES013508 · NIEHS · UNIVERSITY OF PENNSYLVANIA · PI A. Clementina Mesaros · 2006 to 2026
$35.3M
CEBPD-Mediated Mechanisms of Glucocorticoid Insensitivity in Severe AsthmaR01HL133433 · NHLBI · UNIVERSITY OF PENNSYLVANIA · PI HIMES, BLANCA E · 2017 to 2021
$3.2M
MicroRNA-10a in Airway Smooth Muscle and AsthmaR01HL139496 · NHLBI · HARVARD SCHOOL OF PUBLIC HEALTH · PI LU, QUAN · 2018 to 2021
$2.1M
Integrative Analyses to Uncover Biological Mechanisms Mediating Gene Associations with Asthma Drug Response Among Minority ChildrenR01HL141992 · NHLBI · UNIVERSITY OF PENNSYLVANIA · PI BURCHARD, ESTEBAN GONZALEZ, HIMES, BLANCA E · 2018 to 2019
$855k
NHLBI NIH HHS R01 HL133433NHLBI NIH HHS R01 HL139496NHLBI NIH HHS R01 HL141992NIEHS NIH HHS P30 ES005022NIEHS NIH HHS P30 ES013508NIH HHS R01 HL133433NIH HHS R01 HL139496
6 · The paper itself

Abstract

backgroundCCAAT/Enhancer Binding Protein D (CEBPD), a pleiotropic glucocorticoid-responsive transcription factor, modulates inflammatory responses. Of relevance to asthma, expression of CEBPD in airway smooth muscle (ASM) increases with glucocorticoid exposure. We sought to characterize CEBPD-mediated transcriptomic responses to glucocorticoid exposure in ASM by measuring changes observed after knockdown of CEBPD and its impact on asthma-related ASM function.

methodsPrimary ASM cells derived from four donors were transfected with CEBPD or non-targeting (NT) siRNA and exposed to vehicle control, budesonide (100 nM, 18 h), TNFα (10 ng/ml, 18 h), or both budesonide and TNFα. Subsequently, RNA-Seq was used to measure gene expression levels, and pairwise differential expression results were obtained for exposures versus vehicle and knockdown versus control conditions. Weighted gene co-expression analysis was performed to identify groups of genes with similar expression patterns across the various experimental conditions (i.e., CEBPD knockdown status, exposures).

resultsCEBPD knockdown altered expression of 3037 genes under at least one exposure (q-value < 0.05). Co-expression analysis identified sets of 197, 152 and 290 genes that were correlated with CEBPD knockdown status, TNFα exposure status, and both, respectively. JAK-STAT signaling pathway genes, including IL6R and SOCS3, were among those influenced by both TNFα and CEBPD knockdown. Immunoblot assays revealed that budesonide-induced IL-6R protein expression and augmented IL-6-induced STAT3 phosphorylation levels were attenuated by CEBPD knockdown in ASM.

conclusionsCEBPD modulates glucocorticoid responses in ASM, in part via modulation of IL-6 receptor signaling.

Indexed as

AsthmaGlucocorticoidsBudesonideCCAAT-Enhancer-Binding Protein-deltaHumansMuscle, SmoothMyocytes, Smooth MuscleTranscriptomeTumor Necrosis Factor-alphaBudesonideCCAAT-Enhancer-Binding Protein-deltaCEBPD protein, humanGlucocorticoidsTumor Necrosis Factor-alphaAirway smooth muscleAsthmaCEBPDGlucocorticoid responseInflammatory responseRNA-SeqTNFα

Identifiers

PMID35902923
PMCPMC9331514
OpenAlexW4288084812

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.