Evidence map›Paper›PMID 35902900›Full record

ArticleMicrobiome2022

Microbiota responses to different prebiotics are conserved within individuals and associated with habitual fiber intake.

Zachary C Holmes, Max M Villa, Heather K Durand, Sharon Jiang, Eric P Dallow, Brianna L Petrone, Justin D Silverman, Pao-Hwa Lin, Lawrence A David

Abstract readVideo-Audio Media
In one paragraph

Article in Microbiome, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 96 papers.

0numbers the graph read from it
0cells of the map it votes in
96citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

96 citing papers in PubMed.

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  20. Improving Growth Dynamics ofInternational journal of molecular sciences · 2026
    Article

36 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Zachary C HolmesDepartment of Molecular Genetics and Microbiology, Duke University, 3 Genome Court, Durham, NC, 27705, USA.
Max M VillaDepartment of Molecular Genetics and Microbiology, Duke University, 3 Genome Court, Durham, NC, 27705, USA.
Heather K DurandDepartment of Molecular Genetics and Microbiology, Duke University, 3 Genome Court, Durham, NC, 27705, USA.
Sharon JiangDepartment of Molecular Genetics and Microbiology, Duke University, 3 Genome Court, Durham, NC, 27705, USA.
Eric P DallowDepartment of Molecular Genetics and Microbiology, Duke University, 3 Genome Court, Durham, NC, 27705, USA.
Brianna L PetroneDepartment of Molecular Genetics and Microbiology, Duke University, 3 Genome Court, Durham, NC, 27705, USA.
Justin D SilvermanCollege of Information Science and Technology, Penn State University, Westgate Bldg, University Park, PA, 16802, USA.
Pao-Hwa LinDuke Molecular Physiology Institute, Duke University, Stedman Nutrition Ctr, 3475 Erwin Rd, Durham, NC, 27705, USA.
Lawrence A DavidDepartment of Molecular Genetics and Microbiology, Duke University, 3 Genome Court, Durham, NC, 27705, USA. lawrence.david@duke.edu.

Funding

MEDICAL SCIENTIST TRAINING PROGRAMT32GM007171 · NIGMS · DUKE UNIVERSITY · PI KONTOS, CHRISTOPHER D · 1985 to 2021
$31.2M
Medical Scientist Training Program Training GrantT32GM145449 · NIGMS · DUKE UNIVERSITY · PI Christopher D Kontos · 2022 to 2026
$6.6M
Personalizing prebiotic therapies that target human gut microbiotaR01DK116187 · NIDDK · DUKE UNIVERSITY · PI Lawrence Anthony David · 2018 to 2026
$3.7M
Using DNA sequencing to assess dietary species richnessR01DK128611 · NIDDK · DUKE UNIVERSITY · PI Lawrence Anthony David · 2022 to 2026
$2.9M
NIDDK NIH HHS R01 DK116187NIDDK NIH HHS R01 DK128611NIGMS NIH HHS T32 GM007171NIGMS NIH HHS T32 GM145449
6 · The paper itself

Abstract

backgroundShort-chain fatty acids (SCFAs) derived from gut bacteria are associated with protective roles in diseases ranging from obesity to colorectal cancers. Intake of microbially accessible dietary fibers (prebiotics) lead to varying effects on SCFA production in human studies, and gut microbial responses to nutritional interventions vary by individual. It is therefore possible that prebiotic therapies will require customizing to individuals.

resultsHere, we explored prebiotic personalization by conducting a three-way crossover study of three prebiotic treatments in healthy adults. We found that within individuals, metabolic responses were correlated across the three prebiotics. Individual identity, rather than prebiotic choice, was also the major determinant of SCFA response. Across individuals, prebiotic response was inversely related to basal fecal SCFA concentration, which, in turn, was associated with habitual fiber intake. Experimental measures of gut microbial SCFA production for each participant also negatively correlated with fiber consumption, supporting a model in which individuals' gut microbiota are limited in their overall capacity to produce fecal SCFAs from fiber.

conclusionsOur findings support developing personalized prebiotic regimens that focus on selecting individuals who stand to benefit, and that such individuals are likely to be deficient in fiber intake. Video Abstract.

Indexed as

Gastrointestinal MicrobiomePrebioticsAdultCross-Over StudiesDietary FiberFatty Acids, VolatileFecesHumansDietary FiberFatty Acids, VolatilePrebioticsDietFiberMicrobiomePersonalized nutritionPrebioticShort-chain fatty acids

Identifiers

PMID35902900
PMCPMC9336045

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.