Evidence map›Paper›PMID 35902721›Full record

ArticleScientific reports2022

Accurate automatic object 4D tracking in digital in-line holographic microscopy based on computationally rendered dark fields.

Mikołaj Rogalski, Jose Angel Picazo-Bueno, Julianna Winnik, Piotr Zdańkowski, Vicente Micó, Maciej Trusiak

Abstract read
In one paragraph

Article in Scientific reports, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Mikołaj RogalskiWarsaw University of Technology, Institute of Micromechanics and Photonics, 8 Sw. A. Boboli St., 02-525, Warsaw, Poland.
Jose Angel Picazo-BuenoDepartamento de Óptica y de Optometría y Ciencias de la Visión, Universitat de Valencia, C/Doctor Moliner 50, 46100, Burjassot, Spain.
Julianna WinnikWarsaw University of Technology, Institute of Micromechanics and Photonics, 8 Sw. A. Boboli St., 02-525, Warsaw, Poland.
Piotr ZdańkowskiWarsaw University of Technology, Institute of Micromechanics and Photonics, 8 Sw. A. Boboli St., 02-525, Warsaw, Poland.
Vicente MicóDepartamento de Óptica y de Optometría y Ciencias de la Visión, Universitat de Valencia, C/Doctor Moliner 50, 46100, Burjassot, Spain.
Maciej TrusiakWarsaw University of Technology, Institute of Micromechanics and Photonics, 8 Sw. A. Boboli St., 02-525, Warsaw, Poland. maciej.trusiak@pw.edu.pl.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Building on Gabor seminal principle, digital in-line holographic microscopy provides efficient means for space-time investigations of large volumes of interest. Thus, it has a pivotal impact on particle tracking that is crucial in advancing various branches of science and technology, e.g., microfluidics and biophysical processes examination (cell motility, migration, interplay etc.). Well-established algorithms often rely on heavily regularized inverse problem modelling and encounter limitations in terms of tracking accuracy, hologram signal-to-noise ratio, accessible object volume, particle concentration and computational burden. This work demonstrates the DarkTrack algorithm-a new approach to versatile, fast, precise, and robust 4D holographic tracking based on deterministic computationally rendered high-contrast dark fields. Its unique capabilities are quantitatively corroborated employing a novel numerical engine for simulating Gabor holographic recording of time-variant volumes filled with predefined dynamic particles. Our solution accounts for multiple scattering and thus it is poised to secure an important gap in holographic particle tracking technology and allow for ground-truth-driven benchmarking and quantitative assessment of tracking algorithms. Proof-of-concept experimental evaluation of DarkTrack is presented via analyzing live spermatozoa. Software supporting both novel numerical holographic engine and DarkTrack algorithm is made open access, which opens new possibilities and sets the stage for democratization of robust holographic 4D particle examination.

Indexed as

HolographyMicroscopyAlgorithmsSignal-To-Noise RatioSoftware

Identifiers

PMID35902721
PMCPMC9334364

What OpenQuestion holds

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.