Evidence map›Paper›PMID 35902598›Full record

ArticleNature communications2022

Phosphatidylinositol-4-phosphate controls autophagosome formation in Arabidopsis thaliana.

Rodrigo Enrique Gomez, Clément Chambaud, Josselin Lupette, Julie Castets, Stéphanie Pascal, Lysiane Brocard, Lise Noack, Yvon Jaillais, Jérôme Joubès, Amélie Bernard

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
7.3field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 49 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Rodrigo Enrique GomezLaboratoire de Biogenèse Membranaire, UMR 5200, CNRS, Univ. Bordeaux, F-33140, Villenave d'Ornon, France.
Clément ChambaudLaboratoire de Biogenèse Membranaire, UMR 5200, CNRS, Univ. Bordeaux, F-33140, Villenave d'Ornon, France.ORCID http://orcid.org/0000-0002-0351-212X
Josselin LupetteLaboratoire de Biogenèse Membranaire, UMR 5200, CNRS, Univ. Bordeaux, F-33140, Villenave d'Ornon, France.ORCID http://orcid.org/0000-0002-7842-575X
Julie CastetsLaboratoire de Biogenèse Membranaire, UMR 5200, CNRS, Univ. Bordeaux, F-33140, Villenave d'Ornon, France.
Stéphanie PascalLaboratoire de Biogenèse Membranaire, UMR 5200, CNRS, Univ. Bordeaux, F-33140, Villenave d'Ornon, France.ORCID http://orcid.org/0000-0002-9956-6113
Lysiane BrocardPlant Imaging Platform, Bordeaux Imaging Center, UMS 3420, CNRS, Univ. Bordeaux, F-33140, Villenave d'Ornon, France.
Lise NoackLaboratoire Reproduction et Développement des Plantes, Univ. Lyon, ENS de Lyon, CNRS, INRAE, F-69342, Lyon, France.
Yvon JaillaisLaboratoire Reproduction et Développement des Plantes, Univ. Lyon, ENS de Lyon, CNRS, INRAE, F-69342, Lyon, France.ORCID http://orcid.org/0000-0003-4923-883X
Jérôme JoubèsLaboratoire de Biogenèse Membranaire, UMR 5200, CNRS, Univ. Bordeaux, F-33140, Villenave d'Ornon, France.ORCID http://orcid.org/0000-0001-5385-450X
Amélie BernardLaboratoire de Biogenèse Membranaire, UMR 5200, CNRS, Univ. Bordeaux, F-33140, Villenave d'Ornon, France. amelie.bernard@u-bordeaux.fr.ORCID http://orcid.org/0000-0001-7073-2440
Centre National de la Recherche Scientifique · FRUniversité Claude Bernard Lyon 1 · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Autophagy is an intracellular degradation mechanism critical for plant acclimation to environmental stresses. Central to autophagy is the formation of specialized vesicles, the autophagosomes, which target and deliver cargo to the lytic vacuole. How autophagosomes form in plant cells remains poorly understood. Here, we uncover the importance of the lipid phosphatidylinositol-4-phosphate in autophagy using pharmacological and genetical approaches. Combining biochemical and live-microscopy analyses, we show that PI4K activity is required for early stages of autophagosome formation. Further, our results show that the plasma membrane-localized PI4Kα1 is involved in autophagy and that a substantial portion of autophagy structures are found in proximity to the PI4P-enriched plasma membrane. Together, our study unravels critical insights into the molecular determinants of autophagy, proposing a model whereby the plasma membrane provides PI4P to support the proper assembly and expansion of the phagophore thus governing autophagosome formation in Arabidopsis.

Indexed as

ArabidopsisAutophagosomesAutophagyAutophagy-Related ProteinsPhosphatidylinositol PhosphatesAutophagy-Related Proteinsphosphatidylinositol 4-phosphatePhosphatidylinositol Phosphates

Identifiers

PMID35902598
PMCPMC9334301
OpenAlexW4288436247

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.