Evidence map›Paper›PMID 35901898›Full record

ArticleThe Science of the total environment2022

Development of a magnetic nanoparticle-based method for concentrating SARS-CoV-2 in wastewater.

Made Sandhyana Angga, Bikash Malla, Sunayana Raya, Ayame Kitano, Xiaomao Xie, Hiroshi Saitoh, Noriyuki Ohnishi, Eiji Haramoto

Open access · hybridAbstract read
In one paragraph

Article in The Science of the total environment, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed, 1 pooled it
1.7field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 1 synthesis or guideline pooled it, 18 citations in OpenAlex.

  1. Pooled it
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Made Sandhyana AnggaDepartment of Engineering, University of Yamanashi, 4-3-11 Takeda, Kofu, Yamanashi 400-8511, Japan.
Bikash MallaInterdisciplinary Center for River Basin Environment, University of Yamanashi, 4-3-11 Takeda, Kofu, Yamanashi 400-8511, Japan.
Sunayana RayaDepartment of Engineering, University of Yamanashi, 4-3-11 Takeda, Kofu, Yamanashi 400-8511, Japan.
Ayame KitanoYokohama R&D Center, JNC Corporation, 5-1 Okawa, Kanazawa-ku, Yokohama, Kanagawa 236-8605, Japan. Electronic address: a.kitano@jnc-corp.co.jp.
Xiaomao XieYokohama R&D Center, JNC Corporation, 5-1 Okawa, Kanazawa-ku, Yokohama, Kanagawa 236-8605, Japan. Electronic address: xiexiaomao@jnc-corp.co.jp.
Hiroshi SaitohYokohama R&D Center, JNC Corporation, 5-1 Okawa, Kanazawa-ku, Yokohama, Kanagawa 236-8605, Japan. Electronic address: h.saitoh@jnc-corp.co.jp.
Noriyuki OhnishiCorporate Research and Development Division, JNC Corporation, 5-1 Goikaigan, Ichihara, Chiba 290-8551, Japan. Electronic address: onishi@jnc-corp.co.jp.
Eiji HaramotoInterdisciplinary Center for River Basin Environment, University of Yamanashi, 4-3-11 Takeda, Kofu, Yamanashi 400-8511, Japan. Electronic address: eharamoto@yamanashi.ac.jp.
JGC (Japan) · JPUniversity of Yamanashi · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Several virus concentration methods have been developed to increase the detection sensitivity of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) in wastewater, as part of applying wastewater-based epidemiology. Polyethylene glycol (PEG) precipitation method, a method widely used for concentrating viruses in wastewater, has some limitations, such as long processing time. In this study, Pegcision, a PEG-based method using magnetic nanoparticles (MNPs), was applied to detect SARS-CoV-2 in wastewater, with several modifications to increase its sensitivity and throughput. An enveloped virus surrogate, Pseudomonas phage φ6, and a non-enveloped virus surrogate, coliphage MS2, were seeded into wastewater samples and quantified using reverse transcription-quantitative polymerase chain reaction to assess the recovery performance of the Pegcision. Neither increasing MNP concentration nor reducing the reaction time to 10 min affected the recovery, while adding polyacrylic acid as a polyanion improved the detection sensitivity. The performance of the Pegcision was further compared to that of the PEG precipitation method based on the detection of SARS-CoV-2 and surrogate viruses, including indigenous pepper mild mottle virus (PMMoV), in wastewater samples (n = 27). The Pegcision showed recovery of 14.1 ± 6.3 % and 1.4 ± 1.0 % for φ6 and MS2, respectively, while the PEG precipitation method showed recovery of 20.4 ± 20.2 % and 18.4 ± 21.9 % (n = 27 each). Additionally, comparable PMMoV concentrations were observed between the Pegcision (7.9 ± 0.3 log copies/L) and PEG precipitation methods (8.0 ± 0.2 log copies/L) (P > 0.05) (n = 27). SARS-CoV-2 RNA was successfully detected in 11 (41 %) each of 27 wastewater samples using the Pegcision and PEG precipitation methods. The Pegcision showed comparable performance with the PEG precipitation method for SARS-CoV-2 RNA concentration, suggesting its applicability as a virus concentration method.

Indexed as

COVID-19Magnetite NanoparticlesHumansPolyethylene GlycolsRNA, ViralSARS-CoV-2TobamovirusWastewaterMagnetite NanoparticlesPolyethylene GlycolsRNA, ViralWastewaterMagnetic nanoparticlePegcisionPolyethylene glycol precipitationSARS-CoV-2Virus concentrationWastewater-based epidemiology

Identifiers

PMID35901898
PMCPMC9310541
OpenAlexW4287511641

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.