Evidence map›Paper›PMID 35901164›Full record

ArticleScience (New York, N.Y.)2022

Analysis of somatic mutations in 131 human brains reveals aging-associated hypermutability.

Taejeong Bae, Liana Fasching, Yifan Wang, Joo Heon Shin, Milovan Suvakov, Yeongjun Jang, Scott Norton, Caroline Dias, Jessica Mariani, Alexandre Jourdon and 17 more

Open access · greenAbstract read
In one paragraph

Article in Science (New York, N.Y.), 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 44 papers.

0numbers the graph read from it
0cells of the map it votes in
44citing papers in PubMed
12.3field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

44 citing papers in PubMed, 68 citations in OpenAlex.

  1. Pervasive Somatic Mutations inbioRxiv : the preprint server for biology · 2026
    Article
  2. Review
  3. Article
  4. The aging genome exhibits organized vulnerability to somatic mutations.bioRxiv : the preprint server for biology · 2026
    Article
  5. Disease insights from brain somatic mosaicism.Experimental & molecular medicine · 2026
    Review
  6. Article
  7. Biomarkers of ageing of humans and non-human primates.Nature reviews. Molecular cell biology · 2025
    Review
  8. Article
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  12. Review
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

27 authors at 6 institutions in 1 country.

Taejeong Bae *Department of Quantitative Health Sciences, Center for Individualized Medicine, Mayo Clinic, Rochester, MN, USA.ORCID 0000-0002-4626-3725
Liana Fasching *Child Study Center, Yale University, New Haven, CT, USA.ORCID 0000-0002-6840-658X
Yifan Wang *Department of Quantitative Health Sciences, Center for Individualized Medicine, Mayo Clinic, Rochester, MN, USA.ORCID 0000-0001-8056-9755
Joo Heon Shin *Lieber Institute for Brain Development, Johns Hopkins Medical Campus, Baltimore, MD, USA.ORCID 0000-0002-5563-8605
Milovan SuvakovDepartment of Quantitative Health Sciences, Center for Individualized Medicine, Mayo Clinic, Rochester, MN, USA.ORCID 0000-0002-5839-9611
Yeongjun JangDepartment of Quantitative Health Sciences, Center for Individualized Medicine, Mayo Clinic, Rochester, MN, USA.ORCID 0000-0002-7816-3278
Scott NortonChild Study Center, Yale University, New Haven, CT, USA.ORCID 0000-0002-1366-0628
Caroline DiasDivision of Genetics and Genomics and Howard Hughes Medical Institute, Boston Children's Hospital, Boston, MA, USA.
Jessica MarianiChild Study Center, Yale University, New Haven, CT, USA.
Alexandre JourdonChild Study Center, Yale University, New Haven, CT, USA.ORCID 0000-0002-6074-1498
Feinan WuChild Study Center, Yale University, New Haven, CT, USA.ORCID 0000-0002-4962-1874
Arijit PandaDepartment of Quantitative Health Sciences, Center for Individualized Medicine, Mayo Clinic, Rochester, MN, USA.ORCID 0000-0001-5156-6459
Reenal PattniDepartment of Psychiatry and Behavioral Sciences and Department of Genetics, Stanford University School of Medicine, Stanford, CA, USA.ORCID 0000-0003-4490-731X
Yasmine ChahineDivision of Genetics and Genomics and Howard Hughes Medical Institute, Boston Children's Hospital, Boston, MA, USA.
Rebecca YehDivision of Genetics and Genomics and Howard Hughes Medical Institute, Boston Children's Hospital, Boston, MA, USA.
Rosalinda C RobertsDepartment of Psychiatry and Behavioral Neurobiology, University of Alabama at Birmingham, Birmingham, AL, USA.
Anita HuttnerDepartment of Pathology, Yale University, New Haven, CT, USA.
Joel E KleinmanLieber Institute for Brain Development, Johns Hopkins Medical Campus, Baltimore, MD, USA.ORCID 0000-0002-4210-6052
Thomas M HydeLieber Institute for Brain Development, Johns Hopkins Medical Campus, Baltimore, MD, USA.ORCID 0000-0002-8746-3037
Richard E StraubLieber Institute for Brain Development, Johns Hopkins Medical Campus, Baltimore, MD, USA.ORCID 0000-0002-2084-3676
Christopher A WalshDivision of Genetics and Genomics and Howard Hughes Medical Institute, Boston Children's Hospital, Boston, MA, USA.ORCID 0000-0002-0156-2238
Brain Somatic Mosaicism Network§
Alexander E UrbanDepartment of Psychiatry and Behavioral Sciences and Department of Genetics, Stanford University School of Medicine, Stanford, CA, USA.ORCID 0000-0001-9772-933X
James F LeckmanChild Study Center, Yale University, New Haven, CT, USA.ORCID 0000-0002-3902-4478
Daniel R WeinbergerLieber Institute for Brain Development, Johns Hopkins Medical Campus, Baltimore, MD, USA.ORCID 0000-0003-2409-2969
Flora M VaccarinoChild Study Center, Yale University, New Haven, CT, USA.ORCID 0000-0003-2167-981X
Alexej AbyzovDepartment of Quantitative Health Sciences, Center for Individualized Medicine, Mayo Clinic, Rochester, MN, USA.ORCID 0000-0001-5405-6729
Johns Hopkins University · USMayo Clinic · USYale University · USBoston Children's Hospital · USStanford University · USUniversity of Alabama at Birmingham · US

Funding

Yale Clinical and Translational Science Award (U Component)UL1TR001863 · NCATS · YALE UNIVERSITY · PI John H. Krystal, LUCILA OHNO-MACHADO · 2016 to 2026
$102.9M
Medical Scientist Training ProgramT32GM007753 · NIGMS · HARVARD UNIVERSITY (MEDICAL SCHOOL) · PI WALENSKY, LOREN DAVID · 1985 to 2021
$50.0M
Yale Alzheimer Disease Research CenterP30AG066508 · NIA · YALE UNIVERSITY · PI Anita Juliane Huttner · 2020 to 2026
$30.2M
PREDOCTORAL TRAINING IN GENETICST32GM007544 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI MORAN, JOHN V. · 1985 to 2022
$11.3M
1/2-Somatic mosaicism and autism spectrum disorderU01MH106883 · NIMH · BOSTON CHILDREN'S HOSPITAL · PI PARK, PETER J, WALSH, CHRISTOPHER A. · 2015 to 2019
$9.2M
Somatic Mosaicism in Schizophrenia and Control BrainsU01MH106891 · NIMH · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI AKBARIAN, SCHAHRAM, CHESS, ANDREW J · 2015 to 2019
$7.3M
Somatic Mosaicism in the Brain of Tourette SyndromeU01MH106876 · NIMH · YALE UNIVERSITY · PI VACCARINO, FLORA M · 2015 to 2019
$6.1M
3/3-Schizophrenia Genetics and Brain Somatic MosaicismU01MH106882 · NIMH · SALK INSTITUTE FOR BIOLOGICAL STUDIES · PI GAGE, FRED H · 2015 to 2019
$5.3M
Mosaicism in focal cortical dysplasias spectrum seen in neuropsychiatric diseaseU01MH108898 · NIMH · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI GLEESON, JOSEPH G · 2015 to 2019
$5.1M
Molecular Diversity Among Hippocampal and Entorhinal Cells in Aging and Alzheimer's DiseaseRF1AG074341 · NIA · YALE UNIVERSITY · PI HUTTNER, ANITA JULIANE, SESTAN, NENAD · 2021 to 2021
$4.9M
2/3 Schizophrenia Genetics and Brain Somatic MosaicismU01MH106892 · NIMH · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI MORAN, JOHN V. · 2015 to 2019
$4.7M
Neurodevelopment of Tourette syndromeR01MH118453 · NIMH · YALE UNIVERSITY · PI FLORA M VACCARINO · 2019 to 2026
$4.0M
NCATS NIH HHS UL1 TR001863NCI NIH HHS U24 CA220242NIA NIH HHS P30 AG066508NIA NIH HHS RF1 AG074341NIGMS NIH HHS T32 GM007544NIGMS NIH HHS T32 GM007753NIMH NIH HHS F31 MH124393NIMH NIH HHS R01 MH109648NIMH NIH HHS R01 MH118453NIMH NIH HHS U01 MH106874NIMH NIH HHS U01 MH106876NIMH NIH HHS U01 MH106882NIMH NIH HHS U01 MH106883NIMH NIH HHS U01 MH106884NIMH NIH HHS U01 MH106891NIMH NIH HHS U01 MH106892NIMH NIH HHS U01 MH106893NIMH NIH HHS U01 MH108898NINDS NIH HHS R01 NS083823
6 · The paper itself

Abstract

We analyzed 131 human brains (44 neurotypical, 19 with Tourette syndrome, 9 with schizophrenia, and 59 with autism) for somatic mutations after whole genome sequencing to a depth of more than 200×. Typically, brains had 20 to 60 detectable single-nucleotide mutations, but ~6% of brains harbored hundreds of somatic mutations. Hypermutability was associated with age and damaging mutations in genes implicated in cancers and, in some brains, reflected in vivo clonal expansions. Somatic duplications, likely arising during development, were found in ~5% of normal and diseased brains, reflecting background mutagenesis. Brains with autism were associated with mutations creating putative transcription factor binding motifs in enhancer-like regions in the developing brain. The top-ranked affected motifs corresponded to MEIS (myeloid ectopic viral integration site) transcription factors, suggesting a potential link between their involvement in gene regulation and autism.

Indexed as

AgingAutistic DisorderBrainMutagenesisTranscription FactorsEnhancer Elements, GeneticGene Expression RegulationHumansMutationProtein BindingWhole Genome SequencingTranscription Factors

Identifiers

PMID35901164
PMCPMC9420557
OpenAlexW4288422732

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.