Evidence map›Paper›PMID 35899127›Full record

ArticleFrontiers in neuroanatomy2022

An EvoDevo Study of Salmonid Visual Opsin Dynamics and Photopigment Spectral Sensitivity.

Mariann Eilertsen, Wayne Iwan Lee Davies, Dharmeshkumar Patel, Jonathan E Barnes, Rita Karlsen, Jessica Kate Mountford, Deborah L Stenkamp, Jagdish Suresh Patel, Jon Vidar Helvik

Open access · goldAbstract read
In one paragraph

Article in Frontiers in neuroanatomy, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.7field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 8 citations in OpenAlex.

  1. Article
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  4. Photoperiodic history modulates the response of the saccus vasculosus transcriptome to seawater exposure in Atlantic salmon.Journal of comparative physiology. A, Neuroethology, sensory, neural, and behavioral physiology · 2026
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 4 countries.

Mariann EilertsenDepartment of Biological Sciences, University of Bergen, Bergen, Norway.
Wayne Iwan Lee DaviesUmeå Centre for Molecular Medicine, Umeå University, Umeå, Sweden.
Dharmeshkumar PatelInstitute for Modeling Collaboration and Innovation (IMCI), University of Idaho, Moscow, ID, United States.
Jonathan E BarnesInstitute for Modeling Collaboration and Innovation (IMCI), University of Idaho, Moscow, ID, United States.
Rita KarlsenDepartment of Biological Sciences, University of Bergen, Bergen, Norway.
Jessica Kate MountfordSchool of Life Sciences, College of Science, Health and Engineering, La Trobe University, Melbourne, VIC, Australia.
Deborah L StenkampDepartment of Biological Sciences, University of Idaho, Moscow, ID, United States.
Jagdish Suresh PatelInstitute for Modeling Collaboration and Innovation (IMCI), University of Idaho, Moscow, ID, United States.
Jon Vidar HelvikDepartment of Biological Sciences, University of Bergen, Bergen, Norway.
University of Idaho · USUniversity of Bergen · NOLions Eye Institute · AUUmeå University · SE

Funding

Sequence-structure-function relationships in human visual photopigmentsP20GM104420 · NIGMS · UNIVERSITY OF IDAHO · PI VAN LEUVEN, JAMES · 2015 to 2024
$22.9M
Patterning Genes in Retinal DevelopmentR01EY012146 · NEI · UNIVERSITY OF IDAHO · PI Deborah L Stenkamp · 2004 to 2026
$6.7M
Genomics Resources Core (GRC)P30GM103324 · NIGMS · UNIVERSITY OF IDAHO · PI FORNEY, LARRY J · 2013 to 2017
$5.0M
NEI NIH HHS R01 EY012146NIGMS NIH HHS P20 GM104420NIGMS NIH HHS P30 GM103324
6 · The paper itself

Abstract

Salmonids are ideal models as many species follow a distinct developmental program from demersal eggs and a large yolk sac to hatching at an advanced developmental stage. Further, these economically important teleosts inhabit both marine- and freshwaters and experience diverse light environments during their life histories. At a genome level, salmonids have undergone a salmonid-specific fourth whole genome duplication event (Ss4R) compared to other teleosts that are already more genetically diverse compared to many non-teleost vertebrates. Thus, salmonids display phenotypically plastic visual systems that appear to be closely related to their anadromous migration patterns. This is most likely due to a complex interplay between their larger, more gene-rich genomes and broad spectrally enriched habitats; however, the molecular basis and functional consequences for such diversity is not fully understood. This study used advances in genome sequencing to identify the repertoire and genome organization of visual opsin genes (those primarily expressed in retinal photoreceptors) from six different salmonids [Atlantic salmon (

Indexed as

atomistic molecular simulationeyephotoreceptionRNA in situ hybridizationRNA sequencingsalmonidvisual opsin

Identifiers

PMID35899127
PMCPMC9309310
OpenAlexW4285013314

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.