Evidence map›Paper›PMID 35897915›Full record

ArticleMolecules (Basel, Switzerland)2022

Solanaceae Family Phytochemicals as Inhibitors of 3C-Like Protease of SARS-CoV-2: An In Silico Analysis.

Raisul Awal Mahmood, Anamul Hasan, Mohammed Rahmatullah, Alok K Paul, Rownak Jahan, Khoshnur Jannat, Tohmina Afroze Bondhon, Tooba Mahboob, Veeranoot Nissapatorn, Maria de Lourdes Pereira and 4 more

Open access · goldAbstract read
In one paragraph

Article in Molecules (Basel, Switzerland), 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.1field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 7 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 7 institutions in 5 countries.

Raisul Awal MahmoodDepartment of Chemistry, Bangladesh University of Engineering & Technology, Dhaka 1000, Bangladesh.ORCID 0000-0002-0981-1518
Anamul HasanDepartment of Biotechnology & Genetic Engineering, University of Development Alternative, Dhaka 1207, Bangladesh.ORCID 0000-0002-5903-194X
Mohammed RahmatullahDepartment of Biotechnology & Genetic Engineering, University of Development Alternative, Dhaka 1207, Bangladesh.ORCID 0000-0002-0216-7977
Alok K PaulDepartment of Biotechnology & Genetic Engineering, University of Development Alternative, Dhaka 1207, Bangladesh.ORCID 0000-0002-6090-2407
Rownak JahanDepartment of Biotechnology & Genetic Engineering, University of Development Alternative, Dhaka 1207, Bangladesh.
Khoshnur JannatDepartment of Biotechnology & Genetic Engineering, University of Development Alternative, Dhaka 1207, Bangladesh.
Tohmina Afroze BondhonDepartment of Biotechnology & Genetic Engineering, University of Development Alternative, Dhaka 1207, Bangladesh.
Tooba MahboobSchool of Allied Health Sciences and World Union for Herbal Drug Discovery (WUHeDD), Walailak University, Nakhon Si Thammarat 80160, Thailand.
Veeranoot NissapatornSchool of Allied Health Sciences and World Union for Herbal Drug Discovery (WUHeDD), Walailak University, Nakhon Si Thammarat 80160, Thailand.
Maria de Lourdes PereiraDepartment of Medical Sciences, CICECO-Aveiro Institute of Materials, University of Aveiro, 3810-193 Aveiro, Portugal.ORCID 0000-0001-6703-7869
Tridib K PaulDepartment of Biotechnology & Genetic Engineering, University of Development Alternative, Dhaka 1207, Bangladesh.
Ommay Hany RumiDepartment of Biotechnology & Genetic Engineering, University of Development Alternative, Dhaka 1207, Bangladesh.ORCID 0000-0002-4366-6369
Christophe WiartInstitute for Tropical Biology and Conservation, Universiti Malaysia, Kota Kinabalu 88400, Sabah, Malaysia.
Polrat WilairatanaDepartment of Clinical Tropical Medicine, Faculty of Tropical Medicine, Mahidol University, Bangkok 10400, Thailand.ORCID 0000-0002-2730-7788
University of Development Alternative · BDWalailak University · THBangladesh University of Engineering and Technology · BDMahidol University · THUniversiti of Malaysia Sabah · MYUniversity of Aveiro · PTUniversity of Tasmania · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

COVID-19, caused by the coronavirus SARS-CoV-2, emerged in late December 2019 in Wuhan, China. As of 8 April 2022, the virus has caused a global pandemic, resulting in 494,587,638 infections leading to 6,170,283 deaths around the world. Although several vaccines have received emergency authorization from USA and UK drug authorities and two more in Russia and China, it is too early to comment on the prolonged effectiveness of the vaccines, their availability, and affordability for the developing countries of the world, and the daunting task to vaccinate 7 billion people of the world with two doses of the vaccine with additional booster doses. As a result, it is still worthwhile to search for drugs and several promising leads have been found, mainly through in silico studies. In this study, we have examined the binding energies of several alkaloids and anthocyanin derivatives from the Solanaceae family, a family which contains common consumable vegetables and fruit items such as eggplant, pepper, and tomatoes. Our study demonstrates that Solanaceae family alkaloids such as incanumine and solaradixine, as well as anthocyanins and anthocyanidins, have very high predicted binding energies for the 3C-like protease of SARS-CoV-2 (also known as Mpro). Since Mpro is vital for SARS-CoV-2 replication, the compounds merit potential for further antiviral research towards the objective of obtaining affordable drugs.

Indexed as

AlkaloidsCOVID-19 Drug TreatmentSolanaceaeAnthocyaninsAntiviral AgentsCoronavirus 3C ProteasesCysteine EndopeptidasesHumansMolecular Docking SimulationMolecular Dynamics SimulationPeptide HydrolasesPhytochemicalsProtease InhibitorsSARS-CoV-2VegetablesViral Nonstructural ProteinsAlkaloidsAnthocyaninsAntiviral AgentsCoronavirus 3C ProteasesCysteine EndopeptidasesPeptide HydrolasesPhytochemicalsProtease InhibitorsViral Nonstructural ProteinsanthocyaninsCOVID-19incanumineSARS-CoV-2Solanaceae

Identifiers

PMID35897915
PMCPMC9331421
OpenAlexW4287837805

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.