Evidence map›Paper›PMID 35897793›Full record

ArticleInternational journal of molecular sciences2022

Transcriptomic Profiling of Human Limbus-Derived Stromal/Mesenchymal Stem Cells-Novel Mechanistic Insights into the Pathways Involved in Corneal Wound Healing.

Fatemeh Tavakkoli, Mukesh Damala, Madhuri Amulya Koduri, Abhilash Gangadharan, Amit K Rai, Debasis Dash, Sayan Basu, Vivek Singh

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
2.0field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 14 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 1 country.

Fatemeh TavakkoliProf. Brien Holden Eye Research Center, LV Prasad Eye Institute, Hyderabad 500034, India.
Mukesh DamalaProf. Brien Holden Eye Research Center, LV Prasad Eye Institute, Hyderabad 500034, India.
Madhuri Amulya KoduriProf. Brien Holden Eye Research Center, LV Prasad Eye Institute, Hyderabad 500034, India.
Abhilash GangadharanCSIR-Institute of Genomics and Integrative Biology, Mathura Road Campus, New Delhi 110025, India.
Amit K RaiCenter for Genetic Disorders, Banaras Hindu University, Varanasi 221005, India.
Debasis DashCSIR-Institute of Genomics and Integrative Biology, Mathura Road Campus, New Delhi 110025, India.
Sayan BasuProf. Brien Holden Eye Research Center, LV Prasad Eye Institute, Hyderabad 500034, India.ORCID 0000-0001-5030-5003
Vivek SinghProf. Brien Holden Eye Research Center, LV Prasad Eye Institute, Hyderabad 500034, India.ORCID 0000-0003-3958-5635
L V Prasad Eye Institute · INInstitute of Genomics and Integrative Biology · INBanaras Hindu University · INManipal Academy of Higher Education · IN

Funding

Science and Engineering Research Board EMR/2017/005086SCIENCE AND ENGINEERING RESEARCH BOARD, Government of India. CRG/2018/003514
6 · The paper itself

Abstract

Limbus-derived stromal/mesenchymal stem cells (LMSCs) are vital for corneal homeostasis and wound healing. However, despite multiple pre-clinical and clinical studies reporting the potency of LMSCs in avoiding inflammation and scarring during corneal wound healing, the molecular basis for the ability of LMSCs remains unknown. This study aimed to uncover the factors and pathways involved in LMSC-mediated corneal wound healing by employing RNA-Sequencing (RNA-Seq) in human LMSCs for the first time. We characterized the cultured LMSCs at the stages of initiation (LMSC-P0) and pure population (LMSC-P3) and subjected them to RNA-Seq to identify the differentially expressed genes (DEGs) in comparison to native limbus and cornea, and scleral tissues. Of the 28,000 genes detected, 7800 DEGs were subjected to pathway-specific enrichment Gene Ontology (GO) analysis. These DEGs were involved in Wnt, TGF-β signaling pathways, and 16 other biological processes, including apoptosis, cell motility, tissue remodeling, and stem cell maintenance, etc. Two hundred fifty-four genes were related to wound healing pathways.

Indexed as

Corneal InjuriesMesenchymal Stem CellsCorneaHumansTranscriptomeWound Healingcornealimbusmesenchymal stem cellsocular surfaceregenerationRNA sequencingstromal cellstissue remodelingtranscriptomewound healing

Identifiers

PMID35897793
PMCPMC9368612
OpenAlexW4288041276

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.