Evidence map›Paper›PMID 35897663›Full record

ArticleInternational journal of molecular sciences2022

Evolution of the Membrane Transport Protein Domain.

Siarhei A Dabravolski, Stanislav V Isayenkov

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.6field-weighted citation impact, top 36% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 2 institutions in 2 countries.

Siarhei A DabravolskiDepartment of Biotechnology Engineering, ORT Braude College, Snunit 51, P.O. Box 78, Karmiel 2161002, Israel.ORCID 0000-0002-0547-6310
Stanislav V IsayenkovDepartment of Plant Food Products and Biofortification, Institute of Food Biotechnology and Genomics, NAS of Ukraine, Osipovskogo Str. 2a, 04123 Kyiv, Ukraine.ORCID 0000-0002-3119-1642
Braude College of Engineering Karmiel · ILInstitute of Food Biotechnology and Genomics · UA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Membrane transport proteins are widely present in all living organisms, however, their function, transported substrate, and mechanism of action are unknown. Here we use diverse bioinformatics tools to investigate the evolution of MTPs, analyse domain organisation and loop topology, and study the comparative alignment of modelled 3D structures. Our results suggest a high level of conservancy between MTPs from different taxa on both amino acids and structural levels, which imply some degree of functional similarities. The presence of loop/s of different lengths in various positions suggests tax-on-specific adaptation to transported substrates, intracellular localisation, accessibility for post-translation modifications, and interaction with other proteins. The comparison of modelled structures proposes close relations and a common origin for MTP and Na/H exchanger. Further, a high level of amino acid similarity and identity between archaeal and bacterial MTPs and Na/H exchangers imply conservancy of ion transporting function at least for archaeal and bacterial MTPs.

Indexed as

Membrane Transport ProteinsSodium-Hydrogen ExchangersAmino Acid SequenceBiological TransportIon TransportMembrane Transport ProteinsSodium-Hydrogen Exchangers3D structural analysisdomain architectureGPR155membrane transport proteinmolecular evolutionMTPPIN/PILS

Identifiers

PMID35897663
PMCPMC9330825
OpenAlexW4286587272

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.