Evidence map›Paper›PMID 35896680›Full record

ArticleChromosoma2022

Migration of repetitive DNAs during evolution of the permanent translocation heterozygosity in the oyster plant (Tradescantia section Rhoeo).

Hieronim Golczyk, Eva Hřibová, Jaroslav Doležel, Ángeles Cuadrado, Frauke Garbsch, Stephan Greiner, Monika Janeczko, Marek Szklarczyk, Maciej Masłyk, Konrad Kubiński

Open access · hybridAbstract read
In one paragraph

Article in Chromosoma, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
1.1field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 5 citations in OpenAlex.

  1. From minor loci to major players? Satellite DNA diversification in Crepis sensu stricto.Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology · 2025
    Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 4 countries.

Hieronim GolczykDepartment of Molecular Biology, Institute of Biological Sciences, John Paul II Catholic University of Lublin, Konstantynów 1i, 20-708, Lublin, Poland. h.golczyk@wp.pl.ORCID 0000-0001-6981-2144
Eva HřibováInstitute of Experimental Botany of the Czech Academy of Sciences, Centre of the Region Hanaá for Biotechnological and Agricultural Research, Šlechtitelů 31, 77900, Olomouc, Czech Republic.
Jaroslav DoleželInstitute of Experimental Botany of the Czech Academy of Sciences, Centre of the Region Hanaá for Biotechnological and Agricultural Research, Šlechtitelů 31, 77900, Olomouc, Czech Republic.
Ángeles CuadradoDepartment of Biomedicine and Biotechnology, University of Alcalá, 28871, Alcalá de Henares, Madrid, Spain.
Frauke GarbschMax Planck Institute of Molecular Plant Physiology, Am Mühlenberg 1, 14476, Potsdam-Golm, Germany.
Stephan GreinerMax Planck Institute of Molecular Plant Physiology, Am Mühlenberg 1, 14476, Potsdam-Golm, Germany.
Monika JaneczkoDepartment of Molecular Biology, Institute of Biological Sciences, John Paul II Catholic University of Lublin, Konstantynów 1i, 20-708, Lublin, Poland.
Marek SzklarczykDepartment of Plant Biology and Biotechnology, University of Agriculture in Krakow, Al. 29 Listopada 54, 31-425, Cracow, Poland.
Maciej MasłykDepartment of Molecular Biology, Institute of Biological Sciences, John Paul II Catholic University of Lublin, Konstantynów 1i, 20-708, Lublin, Poland.
Konrad KubińskiDepartment of Molecular Biology, Institute of Biological Sciences, John Paul II Catholic University of Lublin, Konstantynów 1i, 20-708, Lublin, Poland.
John Paul II Catholic University of Lublin · PLCzech Academy of Sciences, Institute of Experimental Botany · CZMax Planck Institute of Molecular Plant Physiology · DEUniversidad de Alcalá · ESUniversity of Agriculture in Krakow · PL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Due to translocation heterozygosity for all chromosomes in the cell complement, the oyster plant (Tradescantia spathacea) forms a complete meiotic ring. It also shows Rabl-arrangement at interphase, featured by polar centromere clustering. We demonstrate that the pericentromeric regions of the oyster plant are homogenized in concert by three subtelomeric sequences: 45S rDNA, (TTTAGGG)n motif, and TSrepI repeat. The Rabl-based clustering of pericentromeric regions may have been an excellent device to combine the subtelomere-pericentromere sequence migration (via inversions) with the pericentromere-pericentromere DNA movement (via whole arm translocations) that altogether led to the concerted homogenization of all the pericentromeric domains by the subtelomeric sequences. We also show that the repetitive sequence landscape of interstitial chromosome regions contains many loci consisting of Arabidopsis-type telomeric sequence or of TSrepI repeat, and it is extensively heterozygous. However, the sequence arrangement on some chromosomal arms suggest segmental inversions that are fully or partially homozygous, a fact that could be explained if the inversions started to create linkages already in a bivalent-forming ancestor. Remarkably, the subterminal TSrepI loci reside exclusively on the longer arms that could be due to sharing sequences between similarly-sized chromosomal arms in the interphase nucleus. Altogether, our study spotlights the supergene system of the oyster plant as an excellent model to link complex chromosome rearrangements, evolution of repetitive sequences, and nuclear architecture.

Indexed as

OstreidaeTradescantiaAnimalsDNA, RibosomalHeterochromatinIn Situ Hybridization, FluorescenceRepetitive Sequences, Nucleic AcidTranslocation, GeneticDNA, RibosomalHeterochromatinInversionsPermanent translocation heterozygosityRabl configurationRepetitive DNATradescantia spathaceaTranslocations

Identifiers

PMID35896680
PMCPMC9470650
OpenAlexW4288052520

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.