Evidence map›Paper›PMID 35896160›Full record

ArticleThoracic cancer2022

Genotyping of cerebrospinal fluid in lung cancer patients with leptomeningeal metastasis.

Naifu Nie, Haodong Zhou, Kejun Zhang, Lan Liu, Nuo Luo, Renyuan Wang, Xin Li, Mengxiao Zhu, Chen Hu, Yubo Wang and 3 more

Open access · goldAbstract read
In one paragraph

Article in Thoracic cancer, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed, 1 pooled it
1.4field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 1 synthesis or guideline pooled it, 9 citations in OpenAlex.

  1. Pooled it
  2. Review
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  4. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 1 institution in 1 country.

Naifu NieDepartment of Respiratory Disease, Daping Hospital, Third Military Medical University (Army Medical University), Chongqing, China.ORCID 0000-0003-1511-6228
Haodong ZhouDepartment of Respiratory Disease, Daping Hospital, Third Military Medical University (Army Medical University), Chongqing, China.
Kejun ZhangDepartment of Outpatients, Daping Hospital, Third Military Medical University (Army Medical University), Chongqing, China.
Lan LiuDepartment of Respiratory Disease, Daping Hospital, Third Military Medical University (Army Medical University), Chongqing, China.
Nuo LuoDepartment of Respiratory Disease, Daping Hospital, Third Military Medical University (Army Medical University), Chongqing, China.
Renyuan WangDepartment of Respiratory Disease, Daping Hospital, Third Military Medical University (Army Medical University), Chongqing, China.
Xin LiDepartment of Respiratory Disease, Daping Hospital, Third Military Medical University (Army Medical University), Chongqing, China.
Mengxiao ZhuDepartment of Respiratory Disease, Daping Hospital, Third Military Medical University (Army Medical University), Chongqing, China.
Chen HuDepartment of Respiratory Disease, Daping Hospital, Third Military Medical University (Army Medical University), Chongqing, China.
Yubo WangDepartment of Respiratory Disease, Daping Hospital, Third Military Medical University (Army Medical University), Chongqing, China.
Zhulin LiuDepartment of Respiratory Disease, Daping Hospital, Third Military Medical University (Army Medical University), Chongqing, China.
Li LiDepartment of Respiratory Disease, Daping Hospital, Third Military Medical University (Army Medical University), Chongqing, China.ORCID 0000-0003-3499-8465
Yong HeDepartment of Respiratory Disease, Daping Hospital, Third Military Medical University (Army Medical University), Chongqing, China.ORCID 0000-0002-9404-798X
Army Medical University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe prognosis of non-small-cell lung cancer (NSCLC) with leptomeningeal metastasis (LM) is poor. Detection of cell-free DNA (cfDNA) by next generation sequencing (NGS) in cerebrospinal fluid (CSF) may facilitate diagnosis of LM and identification of drug resistance mechanisms, yet its clinical use needs to be further verified.

methodsWe performed a retrospective cohort study to assess the genetic profiles of paired CSF and plasma samples in lung cancer patients with LM. Of 17 patients screened, a total of 14 patients with LM and paired NGS tests were enrolled.

resultsAll patients harbor driver gene mutations, including 12 epidermal growth factor receptor (EGFR) activating mutations, 1 anaplastic lymphoma kinase (ALK) rearrangement, and 1 ROS-1 fusion. Genetic mutations were detected in CSF cfDNA from 92.9% patients (13/14), which was significantly higher than that from the plasma (9/14, 64.2%). The mutations were highly divergent between CSF and plasma cfDNA, with a concordance rate of 24.38% and 10 mutations shared by the two media. CSF cfDNA could also benefit the analysis of resistance mechanisms to targeted therapies. In five patients who experienced progression on 1st or 2nd generation EGFR-tyrosine kinase inhibitors (TKIs), RB1 mutation, and amplification of MET and EGFR were detected in CSF cfDNA only. In eight patients with LM progression on osimertinib resistance, EGFR amplification was detected in CSF cfDNA from four patients, whereas no CNVs were detected in the matched plasma samples.

conclusionsIn conclusion, CSF could be superior to plasma in providing a more comprehensive genetic landscape of LM to find out drug resistance mechanisms and guide subsequent treatments.

Indexed as

Carcinoma, Non-Small-Cell LungCell-Free Nucleic AcidsLung NeoplasmsMeningeal CarcinomatosisErbB ReceptorsGenotypeHumansMutationProtein Kinase InhibitorsRetrospective StudiesCell-Free Nucleic AcidsErbB ReceptorsProtein Kinase Inhibitorscell-free DNAcerebrospinal fluidleptomeningeal metastasislung cancernext generation sequencing

Identifiers

PMID35896160
PMCPMC9475227
OpenAlexW4288068126

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.