Evidence map›Paper›PMID 35895696›Full record

ArticlePLoS biology2022

Expanded ACE2 dependencies of diverse SARS-like coronavirus receptor binding domains.

Sarah M Roelle, Nidhi Shukla, Anh T Pham, Anna M Bruchez, Kenneth A Matreyek

Open access · goldAbstract read
In one paragraph

Article in PLoS biology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed
4.7field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed, 48 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Sarah M RoelleDepartment of Pathology, Case Western Reserve University School of Medicine, Cleveland, Ohio, United States of America.
Nidhi ShuklaDepartment of Pathology, Case Western Reserve University School of Medicine, Cleveland, Ohio, United States of America.
Anh T PhamDepartment of Pathology, Case Western Reserve University School of Medicine, Cleveland, Ohio, United States of America.
Anna M BruchezDepartment of Pathology, Case Western Reserve University School of Medicine, Cleveland, Ohio, United States of America.
Kenneth A MatreyekDepartment of Pathology, Case Western Reserve University School of Medicine, Cleveland, Ohio, United States of America.ORCID 0000-0001-9149-551X
University School · US

Funding

TUMOR METABOLISM PROGRAMP30CA043703 · NCI · CASE WESTERN RESERVE UNIVERSITY · PI MARK R CHANCE · 1987 to 2026
$142.3M
Recombinant DNA technologies for multiplex genetic assays in human cellsR35GM142886 · NIGMS · CASE WESTERN RESERVE UNIVERSITY · PI MATREYEK, KENNETH A · 2021 to 2025
$2.0M
Multiplex discovery of synthetic host-protein combinations that inhibit HIVR21AI156907 · NIAID · CASE WESTERN RESERVE UNIVERSITY · PI MATREYEK, KENNETH A · 2021 to 2022
$443k
Identification of Host Directed Drug Targets for SARS-CoV-2 Using Transposon MutagenesisR21AI161275 · NIAID · CASE WESTERN RESERVE UNIVERSITY · PI BRUCHEZ, ANNA · 2021 to 2021
$443k
Massively Parallel Mutational Analyses of Viral Neutralization Mechanisms Against Human Restriction FactorsK22AI141620 · NIAID · CASE WESTERN RESERVE UNIVERSITY · PI MATREYEK, KENNETH A · 2019 to 2020
$270k
Intermediate-Featured Flow CytometerS10OD021559 · OD · CASE WESTERN RESERVE UNIVERSITY · PI JACOBBERGER, JAMES W · 2016 to 2016
$230k
NCI NIH HHS P30 CA043703NIAID NIH HHS K22 AI141620NIAID NIH HHS R21 AI156907NIAID NIH HHS R21 AI161275NIGMS NIH HHS R35 GM142886NIH HHS S10 OD021559
6 · The paper itself

Abstract

Viral spillover from animal reservoirs can trigger public health crises and cripple the world economy. Knowing which viruses are primed for zoonotic transmission can focus surveillance efforts and mitigation strategies for future pandemics. Successful engagement of receptor protein orthologs is necessary during cross-species transmission. The clade 1 sarbecoviruses including Severe Acute Respiratory Syndrome-related Coronavirus (SARS-CoV) and SARS-CoV-2 enter cells via engagement of angiotensin converting enzyme-2 (ACE2), while the receptor for clade 2 and clade 3 remains largely uncharacterized. We developed a mixed cell pseudotyped virus infection assay to determine whether various clades 2 and 3 sarbecovirus spike proteins can enter HEK 293T cells expressing human or Rhinolophus horseshoe bat ACE2 proteins. The receptor binding domains from BtKY72 and Khosta-2 used human ACE2 for entry, while BtKY72 and Khosta-1 exhibited widespread use of diverse rhinolophid ACE2s. A lysine at ACE2 position 31 appeared to be a major determinant of the inability of these RBDs to use a certain ACE2 sequence. The ACE2 protein from Rhinolophus alcyone engaged all known clade 3 and clade 1 receptor binding domains. We observed little use of Rhinolophus ACE2 orthologs by the clade 2 viruses, supporting the likely use of a separate, unknown receptor. Our results suggest that clade 3 sarbecoviruses from Africa and Europe use Rhinolophus ACE2 for entry, and their spike proteins appear primed to contribute to zoonosis under the right conditions.

Indexed as

Angiotensin-Converting Enzyme 2ChiropteraCOVID-19Receptors, CoronavirusAnimalsHumansPeptidyl-Dipeptidase AProtein BindingReceptors, VirusSARS-CoV-2Spike Glycoprotein, CoronavirusAngiotensin-Converting Enzyme 2Peptidyl-Dipeptidase AReceptors, CoronavirusReceptors, VirusSpike Glycoprotein, Coronavirusspike protein, SARS-CoV-2

Identifiers

PMID35895696
PMCPMC9359572
OpenAlexW4288051767

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.