Evidence map›Paper›PMID 35893668›Full record

ReviewViruses2022

Immune Escape Associated with RBD Omicron Mutations and SARS-CoV-2 Evolution Dynamics.

Aleksandr V Kudriavtsev, Anna V Vakhrusheva, Valery N Novosеletsky, Marine E Bozdaganyan, Konstantin V Shaitan, Mikhail P Kirpichnikov, Olga S Sokolova

Open access · goldAbstract readReview
In one paragraph

Review in Viruses, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
4.8field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 50 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Aleksandr V KudriavtsevFaculty of Biology, Lomonosov Moscow State University, 119234 Moscow, Russia.ORCID 0000-0002-3918-5618
Anna V VakhrushevaFaculty of Biology, Lomonosov Moscow State University, 119234 Moscow, Russia.
Valery N NovosеletskyFaculty of Biology, Lomonosov Moscow State University, 119234 Moscow, Russia.
Marine E BozdaganyanFaculty of Biology, Lomonosov Moscow State University, 119234 Moscow, Russia.
Konstantin V ShaitanFaculty of Biology, Lomonosov Moscow State University, 119234 Moscow, Russia.
Mikhail P KirpichnikovFaculty of Biology, Lomonosov Moscow State University, 119234 Moscow, Russia.
Olga S SokolovaFaculty of Biology, Lomonosov Moscow State University, 119234 Moscow, Russia.ORCID 0000-0003-4678-232X
Lomonosov Moscow State University · RU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The evolution and the emergence of new mutations of viruses affect their transmissibility and/or pathogenicity features, depending on different evolutionary scenarios of virus adaptation to the host. A typical trade-off scenario of SARS-CoV-2 evolution has been proposed, which leads to the appearance of an Omicron strain with lowered lethality, yet enhanced transmissibility. This direction of evolution might be partly explained by virus adaptation to therapeutic agents and enhanced escape from vaccine-induced and natural immunity formed by other SARS-CoV-2 strains. Omicron's high mutation rate in the Spike protein, as well as its previously described high genome mutation rate (Kandeel et al., 2021), revealed a gap between it and other SARS-CoV-2 strains, indicating the absence of a transitional evolutionary form to the Omicron strain. Therefore, Omicron has emerged as a new serotype divergent from the evolutionary lineage of other SARS-CoV-2 strains. Omicron is a rapidly evolving variant of high concern, whose new subvariants continue to manifest. Its further understanding and the further monitoring of key mutations that provide virus immune escape and/or high affinity towards the receptor could be useful for vaccine and therapeutic development in order to control the evolutionary direction of the COVID-19 pandemic.

Indexed as

COVID-19Evolution, MolecularImmune EvasionSARS-CoV-2HumansMutationPandemicsSpike Glycoprotein, CoronavirusSpike Glycoprotein, Coronavirusspike protein, SARS-CoV-2bioinformaticsCOVID-19immune escapeOmicronRBD mutationsSARS-CoV-2vaccine development

Identifiers

PMID35893668
PMCPMC9394476
OpenAlexW4287219808

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.