ArticleBiomolecules2022
Spaghetti Tracer: A Framework for Tracing Semiregular Filamentous Densities in 3D Tomograms.
Article in Biomolecules, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.
What it found
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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
6 citing papers in PubMed, 9 citations in OpenAlex.
- ModeHunter: A Package for the Reductionist Analysis, Animation, and Application of Elastic Biomolecular Motion.The journal of physical chemistry. B · 2025Article
- Evaluating Deep Learning Architectures for Actin Filament Segmentation under Varying Noise Conditions in Simulated Cryo-ET Tomograms.Proceedings. IEEE International Conference on Bioinformatics and Biomedicine · 2025Article
- An image processing pipeline for electron cryo-tomography in RELION-5.FEBS open bio · 2024Article
- Untangling Irregular Actin Cytoskeleton Architectures in Tomograms of the Cell withInternational journal of molecular sciences · 2023Article
- Editorial: Special Issue "Protein Modeling and Simulation: Selected Articles from the Computational Structural Bioinformatics Workshop 2021".Biomolecules · 2023Article
- Tracing Randomly Oriented Filaments in a Simulated Actin Network Tomogram.Proceedings. IEEE International Conference on Bioinformatics and Biomedicine · 2022Article
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
4 authors at 1 institution in 1 country.
Funding
Abstract
Within cells, cytoskeletal filaments are often arranged into loosely aligned bundles. These fibrous bundles are dense enough to exhibit a certain regularity and mean direction, however, their packing is not sufficient to impose a symmetry between-or specific shape on-individual filaments. This intermediate regularity is computationally difficult to handle because individual filaments have a certain directional freedom, however, the filament densities are not well segmented from each other (especially in the presence of noise, such as in cryo-electron tomography). In this paper, we develop a dynamic programming-based framework,
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Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.