Evidence map›Paper›PMID 35891648›Full record

ArticlePeerJ2022

Identification and validation of immune related core transcription factors

Minbo Zhang, Yu Zhang, Xiaoxiao Jiao, Linying Lai, Yiting Qian, Bo Sun, Wenzhuo Yang

Open access · goldAbstract read
In one paragraph

Article in PeerJ, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.3field-weighted citation impact, top 42% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 2 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Minbo Zhang *Department of Gastroenterology and Hepatology, Tongji Hospital of Tongji University, Shanghai, China.
Yu Zhang *Department of Gastroenterology and Hepatology, Tongji Hospital of Tongji University, Shanghai, China.
Xiaoxiao JiaoDepartment of Gastroenterology and Hepatology, Tongji Hospital of Tongji University, Shanghai, China.
Linying LaiDepartment of Gastroenterology and Hepatology, Tongji Hospital of Tongji University, Shanghai, China.
Yiting QianDepartment of Gastroenterology and Hepatology, Tongji Hospital of Tongji University, Shanghai, China.
Bo SunDepartment of Gastroenterology and Hepatology, Tongji Hospital of Tongji University, Shanghai, China.
Wenzhuo YangDepartment of Gastroenterology and Hepatology, Tongji Hospital of Tongji University, Shanghai, China.
Tongji University · CNTongji Hospital · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background: Nonalcoholic fatty liver disease (NAFLD) is the most common liver disease worldwide that endangers human health. Transcription factors (TFs) have gradually become hot spots for drug development in NAFLD for their impacts on metabolism. However, the specific TFs that regulate immune response in the development of NAFLD is not clear. This study aimed to investigate the TFs involved in the immune response of NAFLD and provide novel targets for drug development. Methods: Microarray data were obtained from liver samples from 26 normal volunteers and 109 NAFLD patients using the Gene Expression Omnibus (GEO) database. Differentially expressed genes (DEGs) were analyzed by limma package. Differentially expressed transcription factors (DETFs) were obtained on DEGs combined with Cistrome Cancer database. Immune signatures and pathways hallmark were identified by ssGSSEA and GSVA. The co-regulation network was constructed by the above results. Further, quantitative Real-time Polymerase Chain Reaction (qRT-PCR), Western blot (WB) and Immunohistochemistry (IHC) were used to validate the relationship between Results: A total of 617 DEGs and six DETFs ( Conclusion:

Indexed as

Non-alcoholic Fatty Liver DiseaseTranscription Factors, TFIITranscription Factors, TFIIIBiomarkersHumansReceptors, ChemokineTranscription FactorsBiomarkersGTF2I protein, humanReceptors, ChemokineTranscription FactorsTranscription Factors, TFIITranscription Factors, TFIIIChemokine receptor familyGTF2IImmuneNAFLDTF

Identifiers

PMID35891648
PMCPMC9308966
OpenAlexW4286493931

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.