Evidence map›Paper›PMID 35891528›Full record

ArticleViruses2022

Dynamics and Determinants of SARS-CoV-2 RT-PCR Testing on Symptomatic Individuals Attending Healthcare Centers during 2020 in Bahia, Brazil.

Felicidade Mota Pereira, Aline Salomão de Araujo, Ana Catarina Martins Reis, Anadilton Santos da Hora, Francesco Pinotti, Robert S Paton, Camylla Vilas Boas Figueiredo, Caroline Lopes Damasceno, Daiana Carlos Dos Santos, Daniele Souza de Santana and 31 more

Abstract read
In one paragraph

Article in Viruses, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Observational
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

41 authors.

Felicidade Mota PereiraLaboratório Central de Saúde Pública Professor Gonçalo Muniz, Salvador 40295-010, Brazil.ORCID 0000-0002-6938-161X
Aline Salomão de AraujoLaboratório Central de Saúde Pública Professor Gonçalo Muniz, Salvador 40295-010, Brazil.
Ana Catarina Martins ReisLaboratório Central de Saúde Pública Professor Gonçalo Muniz, Salvador 40295-010, Brazil.
Anadilton Santos da HoraLaboratório Central de Saúde Pública Professor Gonçalo Muniz, Salvador 40295-010, Brazil.
Francesco PinottiDepartment of Zoology, University of Oxford, Oxford OX1 3SZ, UK.
Robert S PatonDepartment of Zoology, University of Oxford, Oxford OX1 3SZ, UK.
Camylla Vilas Boas FigueiredoLaboratório Central de Saúde Pública Professor Gonçalo Muniz, Salvador 40295-010, Brazil.
Caroline Lopes DamascenoLaboratório Central de Saúde Pública Professor Gonçalo Muniz, Salvador 40295-010, Brazil.
Daiana Carlos Dos SantosLaboratório Central de Saúde Pública Professor Gonçalo Muniz, Salvador 40295-010, Brazil.
Daniele Souza de SantanaLaboratório Central de Saúde Pública Professor Gonçalo Muniz, Salvador 40295-010, Brazil.
Danielle Freitas SalesLaboratório Central de Saúde Pública Professor Gonçalo Muniz, Salvador 40295-010, Brazil.
Evelyn Ariana Andrade BrandãoLaboratório Central de Saúde Pública Professor Gonçalo Muniz, Salvador 40295-010, Brazil.
Everton da Silva BatistaLaboratório Central de Saúde Pública Professor Gonçalo Muniz, Salvador 40295-010, Brazil.
Fulvia Soares Campos de SousaLaboratório Central de Saúde Pública Professor Gonçalo Muniz, Salvador 40295-010, Brazil.
Gabriela Santana MenezesLaboratório Central de Saúde Pública Professor Gonçalo Muniz, Salvador 40295-010, Brazil.
Jackeline Silveira Dos SantosLaboratório Central de Saúde Pública Professor Gonçalo Muniz, Salvador 40295-010, Brazil.
Jaqueline Gomes LimaLaboratório Central de Saúde Pública Professor Gonçalo Muniz, Salvador 40295-010, Brazil.
Jean Tadeu BritoLaboratório Central de Saúde Pública Professor Gonçalo Muniz, Salvador 40295-010, Brazil.
Lenisa Dandara Dos SantosLaboratório Central de Saúde Pública Professor Gonçalo Muniz, Salvador 40295-010, Brazil.
Luciana ReboredoLaboratório Central de Saúde Pública Professor Gonçalo Muniz, Salvador 40295-010, Brazil.
Maiara Santana SantosLaboratório Central de Saúde Pública Professor Gonçalo Muniz, Salvador 40295-010, Brazil.
Marcela Kelly Astete GomezLaboratório Central de Saúde Pública Professor Gonçalo Muniz, Salvador 40295-010, Brazil.ORCID 0000-0003-4426-6989
Marcia Freitas da CruzLaboratório Central de Saúde Pública Professor Gonçalo Muniz, Salvador 40295-010, Brazil.
Mariana Rosa AmpueroLaboratório Central de Saúde Pública Professor Gonçalo Muniz, Salvador 40295-010, Brazil.
Mariele Guerra Lemos da SilvaLaboratório Central de Saúde Pública Professor Gonçalo Muniz, Salvador 40295-010, Brazil.
Mariza S da Paixão MeloLaboratório Central de Saúde Pública Professor Gonçalo Muniz, Salvador 40295-010, Brazil.
Marta Ferreira da SilvaLaboratório Central de Saúde Pública Professor Gonçalo Muniz, Salvador 40295-010, Brazil.
Nadja de Jesus Gonçalves Dos SantosLaboratório Central de Saúde Pública Professor Gonçalo Muniz, Salvador 40295-010, Brazil.
Núbia de Souza PessoaLaboratório Central de Saúde Pública Professor Gonçalo Muniz, Salvador 40295-010, Brazil.
Ramile Silva de AraujoLaboratório Central de Saúde Pública Professor Gonçalo Muniz, Salvador 40295-010, Brazil.
Taiane de Macedo GodimLaboratório Central de Saúde Pública Professor Gonçalo Muniz, Salvador 40295-010, Brazil.
Stephane Fraga de Oliveira TostaLaboratório de Genética Celular e Molecular, Universidade Federal de Minas Gerais, Belo Horizonte 31270-901, Brazil.
Vanessa Brandão NardyLaboratório Central de Saúde Pública Professor Gonçalo Muniz, Salvador 40295-010, Brazil.
Elaine Cristina FariaLaboratório Central de Saúde Pública Professor Gonçalo Muniz, Salvador 40295-010, Brazil.
Breno Frederico de Carvalho Dominguez SouzaLaboratório Central de Saúde Pública Professor Gonçalo Muniz, Salvador 40295-010, Brazil.
Jessica Laís Almeida Dos SantosLaboratório Central de Saúde Pública Professor Gonçalo Muniz, Salvador 40295-010, Brazil.
Paul WikramaratnaIndependent Researcher, Edinburgh EH9 3JT, UK.
Marta GiovanettiLaboratório de Flavivírus, Instituto Oswaldo Cruz Fiocruz, Rio de Janeiro 21045-900, Brazil.ORCID 0000-0002-5849-7326
Luiz Carlos Junior AlcântaraLaboratório de Flavivírus, Instituto Oswaldo Cruz Fiocruz, Rio de Janeiro 21045-900, Brazil.ORCID 0000-0002-6769-9931
José LourençoBiosystems and Integrative Sciences Institute, Faculdade de Ciências, 1749-016 Lisboa, Portugal.
Arabela Leal E Silva de MelloLaboratório Central de Saúde Pública Professor Gonçalo Muniz, Salvador 40295-010, Brazil.

Funding

University of Washington Arboviral Research Network (UWARN)U01AI151698 · NIAID · UNIVERSITY OF WASHINGTON · PI Michael Gale, PETER MACGARR RABINOWITZ · 2020 to 2026
$13.3M
NIAID NIH HHS U01 AI151698
6 · The paper itself

Abstract

RT-PCR testing data provides opportunities to explore regional and individual determinants of test positivity and surveillance infrastructure. Using Generalized Additive Models, we explored 222,515 tests of a random sample of individuals with COVID-19 compatible symptoms in the Brazilian state of Bahia during 2020. We found that age and male gender were the most significant determinants of test positivity. There was evidence of an unequal impact among socio-demographic strata, with higher positivity among those living in areas with low education levels during the first epidemic wave, followed by those living in areas with higher education levels in the second wave. Our estimated probability of testing positive after symptom onset corroborates previous reports that the probability decreases with time, more than halving by about two weeks and converging to zero by three weeks. Test positivity rates generally followed state-level reported cases, and while a single laboratory performed ~90% of tests covering ~99% of the state's area, test turn-around time generally remained below four days. This testing effort is a testimony to the Bahian surveillance capacity during public health emergencies, as previously witnessed during the recent Zika and Yellow Fever outbreaks.

Indexed as

COVID-19Zika VirusZika Virus InfectionBrazilClinical Laboratory TechniquesCOVID-19 TestingDelivery of Health CareHumansMaleReverse Transcriptase Polymerase Chain ReactionSARS-CoV-2BrazilRT-PCRSARS-CoV-2surveillancetesting

Identifiers

PMID35891528
PMCPMC9321627

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.