Evidence map›Paper›PMID 35891339›Full record

ArticleViruses2022

Comprehensive Linear Epitope Prediction System for Host Specificity in

Tao-Chuan Shih, Li-Ping Ho, Hsin-Yiu Chou, Jen-Leih Wu, Tun-Wen Pai

Abstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Viruses, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Tao-Chuan ShihDepartment of Computer Science and Information Engineering, National Taipei University of Technology, Taipei 10608, Taiwan.
Li-Ping HoDepartment of Aquaculture, National Penghu University of Science and Technology, Penghu 88046, Taiwan.
Hsin-Yiu ChouDepartment of Aquaculture, College of Life Science, National Taiwan Ocean University, Keelung 20224, Taiwan.
Jen-Leih WuDepartment of Bioscience and Biotechnology, National Taiwan Ocean University, Keelung 20224, Taiwan.
Tun-Wen PaiDepartment of Computer Science and Information Engineering, National Taipei University of Technology, Taipei 10608, Taiwan.ORCID 0000-0002-2869-4169

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundMETHODOLOGY: A multi-expert system using five existing LE prediction servers was established to obtain initial LE candidates. Based on the different clustered pathogen groups, both conserved and exclusive LEs among the PRINCIPAL

findingsWe predicted 29 LEs for

conclusionFive identified LEs possessed antigenicity and host specificity for grouper fish. We demonstrate that the proposed method provides an effective approach for in silico LE prediction prior to vaccine development and is especially powerful for analyzing antigen sequences with exclusive features among clustered antigen groups.

Indexed as

NodaviridaeAnimalsAntigensEpitopesFishesHost SpecificityAntigensEpitopeshost specificitylinear epitope Nodaviridaemulti-expert prediction

Identifiers

PMID35891339
PMCPMC9319239

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.